Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.212208
Ckn1
Cockayne syndrome 1 homolog (human)
13
71991
Mm.212208
B130065P18Rik
RIKEN cDNA B130065P18 gene
13
320079
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 24 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CCAGTCAGGT
1.6
0.0016
Cb medulloblastoma
TCCCCAGCAG
(
3
)
2.3
0.0023
P8 GC+1d culture
AAATGCCATA
(
2
)
CCAGTCAGGT
2.2
0.0022
P8 GC+SHH+1d culture
TCCCCAGCAG
(
3
)
1.2
0.0012
3T3 fibroblasts
CCAGTCAGGT
3.5
0.0035
Hypothalamus
AAATGCCATA
(
2
)
CCAGTCAGGT
3.6
0.0036
E12.5 retina
TGTGTGATTG
(
2
)
1.9
0.0019
E14.5 retina
CCAGTCAGGT
TCCCCAGCAG
(
3
)
3.6
0.0036
E16.5 retina
AAATGCCATA
(
2
)
CCAGTCAGGT
5.4
0.0054
E18.5 retina
AAATGCCATA
(
2
)
TCCCCAGCAG
(
3
)
TGTGTGATTG
(
2
)
7.2
0.0072
P0.5 retina
AAATGCCATA
(
2
)
2
0.002
P2.5 retina
TCCCCAGCAG
(
3
)
3.5
0.0035
P4.5 retina
AAATGCCATA
(
2
)
2
0.002
P10.5 crx- retina
TCCCCAGCAG
(
3
)
TGTGTGATTG
(
2
)
3.8
0.0038
P10.5 crx+ retina
CCAGTCAGGT
1.9
0.0019
Adult retinal
AAATGCCATA
(
2
)
TGTGTGATTG
(
2
)
3.8
0.0038
