Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.212549	Hist3h2a	histone 3, H2a	11		319162
Human Homolog	HIST3H2A[histone 3, H2a]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 82 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ACGAATGGTT TTAAAAAAAA (2) TTCAAGTCTT TTCAAGTTTT (2) TTCCAGTCTT 26.1 0.0261 Cb medulloblastoma ACGAATGGTT TTAAAAAAAA (2) TTCAAGTCTT TTCAAGTTTT (2) TTCCAGTCTT 71.6 0.0716 P8 GC+1d culture ACGAATGGTT ATCCATTCCT TCAATTTAAC TTAAAAAAAA (2) TTCAAGTCTT TTCAAGTTTT (2) TTCCAGTCTT 46.6 0.0466 P8 GC+SHH+1d culture ACGAATGGTT GCGGTCGGCA TCAATTTAAC TTAAAAAAAA (2) TTCAAGTCTT TTCAAGTTTT (2) TTCCAGTCTT 47 0.047 3T3 fibroblasts TTCAAGTTTT (2) 3.5 0.0035 E15 cortex ACGAATGGTT TTAAAAAAAA (2) 9.8 0.0098 P1 cortex TTAAAAAAAA (2) TTCAAGTTTT (2) 18.1 0.0181 Hypothalamus ACGAATGGTT TCGTTGTGGG (11) TTAAAAAAAA (2) TTCAAGTCTT TTCAAGTTTT (2) 28.9 0.0289 E12.5 retina GCGGTCGGCA TTAAAAAAAA (2) TTCAAGTCTT TTCAAGTTTT (2) 30.1 0.0301 E14.5 retina ACGAATGGTT ATCCATTCCT TTAAAAAAAA (2) TTCAAGTCTT TTCAAGTTTT (2) 49.1 0.0491 E16.5 retina TCAATTTAAC TTAAAAAAAA (2) TTCAAGTCTT TTCAAGTTTT (2) 39.8 0.0398 E18.5 retina TCGTTGTGGG (11) TTAAAAAAAA (2) TTCAAGTCTT TTCAAGTTTT (2) 98.2 0.0982 P0.5 retina TTAAAAAAAA (2) TTCAAGTCTT TTCAAGTTTT (2) 43.2 0.0432 P2.5 retina TCGTTGTGGG (11) TTAAAAAAAA (2) TTCAAGTCTT TTCAAGTTTT (2) 59.9 0.0599 P4.5 retina TTAAAAAAAA (2) TTCAAGTCTT TTCAAGTTTT (2) 65.5 0.0655 P6.5 retina ACGAATGGTT ATCCATTCCT TTAAAAAAAA (2) TTCAAGTTTT (2) 21.8 0.0218 P10.5 crx- retina ACGAATGGTT TCAATTTAAC TTAAAAAAAA (2) TTCAAGTTTT (2) TTCCAGTCTT 33.5 0.0335 P10.5 crx+ retina ATCCATTCCT TCAATTTAAC TTAAAAAAAA (2) TTCCAGTCTT 21.1 0.0211 Adult retinal ACGAATGGTT TTAAAAAAAA (2) TTCAAGTCTT TTCAAGTTTT (2) 18.6 0.0186 ONL ACGAATGGTT TCAATTTAAC TTAAAAAAAA (2) TTCAAGTCTT 21.1 0.0211