Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.212577	Mta1	metastasis associated 1	12		116870
Gene Ontology	DNA binding | intracellular | nucleus | protein biosynthesis | regulation of transcription, DNA-dependent | ribosome | signal transduction | structural constituent of ribosome | transcription factor activity
Human Homolog	MTA1[metastasis associated 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 54 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CACGGGCAGC GCCACCGAGG GTGGAAAGAC (2) TGGGGAAGAA 16.3 0.0163 Cb medulloblastoma CACGGGCAGC 11.6 0.0116 P8 GC+1d culture AGCTCTGTAA (2) CACGGGCAGC CTCTCTACCT GCCACCGAAG (2) GCCACCGAGG GTGGAAAGAC (2) TGGGGAAGAA 28.5 0.0285 P8 GC+SHH+1d culture CACGGGCAGC GCCACCGAGG GTGGAAAGAC (2) TGGGGAAGAA 27 0.027 3T3 fibroblasts CACGGGCAGC CTCTCTACCT TGGGGAAGAA 24.5 0.0245 E15 cortex TGGGGAAGAA 14.8 0.0148 P1 cortex CACGGGCAGC TGGGGAAGAA 13.6 0.0136 Hypothalamus CACGGGCAGC TGGGGAAGAA 10.9 0.0109 E12.5 retina AGCTCTGTAA (2) GTGGAAAGAC (2) TGGGGAAGAA 17 0.017 E14.5 retina TGGGGAAGAA 1.8 0.0018 E16.5 retina CACGGGCAGC TGGGGAAGAA 9 0.009 E18.5 retina CACGGGCAGC GTGGAAAGAC (2) TGGGGAAGAA 5.4 0.0054 P0.5 retina CACGGGCAGC TGGGGAAGAA 9.8 0.0098 P2.5 retina CACGGGCAGC GCCACCGAAG (2) GTGGAAAGAC (2) TGGGGAAGAA 21.2 0.0212 P4.5 retina CACGGGCAGC CTCTCTACCT GTGGAAAGAC (2) TGGGGAAGAA 25.7 0.0257 P6.5 retina CACGGGCAGC TGGGGAAGAA 11.7 0.0117 P10.5 crx- retina CACGGGCAGC 5.6 0.0056 P10.5 crx+ retina CACGGGCAGC GTGGAAAGAC (2) TGGGGAAGAA 7.6 0.0076 Adult retinal AGCTCTGTAA (2) CACGGGCAGC TGGGGAAGAA 20.5 0.0205 ONL CACGGGCAGC TGGGGAAGAA 13.4 0.0134