Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.21295	Fbxo38	F-box protein 38	18		107035
Gene Ontology	nucleus | receptor activity
Human Homolog	FBXO38[F-box protein 38]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 87 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAAGATTGA AAACGAAAGC CTTTATCTTG GTGACAAAAA (3) TAAATGAATA (2) TTCATATCTG 14.6 0.0146 Cb medulloblastoma AAAAGATTGA AAACGAAAGC GAGGAGGGAG (2) GTGACAAAAA (3) TAAATGAATA (2) TTCATATTTT (2) 30 0.03 P8 GC+1d culture AAAAGATTGA CTTTATCTTG GAGGAGGGAG (2) TTCATATCTG TTCATATTTT (2) 6.7 0.0067 P8 GC+SHH+1d culture CTTTATCTTG GAGGAGGGAG (2) GTGACAAAAA (3) TTCATATCTG TTCATATTTT (2) 9.4 0.0094 3T3 fibroblasts GAGGAGGGAG (2) GCAGGAGAGA 10.5 0.0105 E15 cortex AAACGAAAGC GAGGAGGGAG (2) 9.8 0.0098 P1 cortex GAGGAGGGAG (2) TTCATATCTG 9 0.009 Hypothalamus CTTTATCTTG GAAATTGTAT (3) TAAATGAATA (2) 9 0.009 E12.5 retina AAAAGATTGA CTTTATCTTG GAGGAGGGAG (2) GTAACAAAAA GTGACAAAAA (3) TAAATGAATA (2) TTCATATCTG 28.2 0.0282 E14.5 retina AAAAGATTGA ACCTTCCCTC CTTTATCTTG GTGACAAAAA (3) TAAATGAATA (2) 10.8 0.0108 E16.5 retina CTTTATCTTG GAGGAGGGAG (2) GCAGGAGAGA TAAATGAATA (2) 9 0.009 E18.5 retina CTTTATCTTG GAAATTGTAT (3) GCAGGAGAGA TAAATGAATA (2) TTCATATTTT (2) 10.8 0.0108 P0.5 retina CTTTATCTTG GAGGAGGGAG (2) GTAACAAAAA 13.8 0.0138 P2.5 retina AAAAGATTGA CTTTATCTTG GTGACAAAAA (3) TTCATATCTG TTCATATTTT (2) 10.7 0.0107 P4.5 retina AAAAGATTGA ACCTTCCCTC CTTTATCTTG GTGACAAAAA (3) TTCATATTTT (2) 23.8 0.0238 P6.5 retina AAAAGATTGA ACCTTCCCTC CTTTATCTTG GAAATTGTAT (3) GAGGAGGGAG (2) TTCATATCTG 18.3 0.0183 P10.5 crx- retina AAAAGATTGA CTTTATCTTG GAGGAGGGAG (2) TAAATGAATA (2) TTCATATCTG TTCATATTTT (2) 15 0.015 P10.5 crx+ retina AAAAGATTGA CTTTATCTTG GTAACAAAAA GTGACAAAAA (3) TTCATATCTG 11.4 0.0114 Adult retinal CTTTATCTTG GAGGAGGGAG (2) 13 0.013 ONL AAAAGATTGA GAGGAGGGAG (2) TAAATGAATA (2) 7.6 0.0076