Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.213292	Nit2	nitrilase family, member 2	16	16 38.0 cM	52633
Gene Ontology	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds | mitochondrion | nitrogen metabolism
Human Homolog	NIT2[nitrilase family, member 2]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 82 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ACACTTTTAA CAAATAAAAA (2) TAAATTCACA TTTGAAACTG (3) 17.9 0.0179 Cb medulloblastoma ACACTTTTAA CAAATAAAAA (2) TAAATTCACA 30 0.03 P8 GC+1d culture ACACTTTTAA CAAATAAAAA (2) TAAATTCACA TTAATTCTAT TTTGAAACTG (3) 13.6 0.0136 P8 GC+SHH+1d culture ACACTTTTAA CAAACTAAAA CAAATAAAAA (2) CTTCAGTGTT (2) TAAATTCACA TAATCAGAAT TTAATTCTAT 25.9 0.0259 E15 cortex CAAATAAAAA (2) TTTGAAACTG (3) 9.8 0.0098 P1 cortex CAAATAAAAA (2) TAAATTCACA TTTGAAACTG (3) 13.5 0.0135 Hypothalamus CAAATAAAAA (2) CTTCAGTGTT (2) TAAATTCACA 23.5 0.0235 E12.5 retina ACACTTTTAA CAAATAAAAA (2) TAAATTCACA 22.6 0.0226 E14.5 retina ACACTTTTAA CAAATAAAAA (2) CTTCAGTGTT (2) TAAATTCACA TTTGAAACTG (3) 19.9 0.0199 E16.5 retina ACACTTTTAA CAAATAAAAA (2) CTTCAGTGTT (2) TAAATTCACA TTTGAAACTG (3) 21.6 0.0216 E18.5 retina CAAACTAAAA CAAATAAAAA (2) TAAATTCACA TTAATTCTAT TTTGAAACTG (3) 21.7 0.0217 P0.5 retina CAAATAAAAA (2) TAAATTCACA TGCTAAACCA TTTGAAACTG (3) 9.9 0.0099 P2.5 retina CAAATAAAAA (2) TAAATTCACA TTTGAAACTG (3) 19.4 0.0194 P4.5 retina ACACTTTTAA CAAATAAAAA (2) TAAATTCACA TGCTAAACCA 33.7 0.0337 P6.5 retina ACACTTTTAA CAAATAAAAA (2) TAAATTCACA TGCTAAACCA TTAATTCTAT TTTGAAACTG (3) 41.8 0.0418 P10.5 crx- retina ACACTTTTAA TAAATTCACA TAATCAGAAT TGCTAAACCA TTAATTCTAT TTTGAAACTG (3) 31.6 0.0316 P10.5 crx+ retina ACACTTTTAA CAAATAAAAA (2) TAAATTCACA TAATCAGAAT TTTGAAACTG (3) 23 0.023 Adult retinal CAAATAAAAA (2) CTTCAGTGTT (2) TAAATTCACA TTAATTCTAT TTTGAAACTG (3) 13.2 0.0132 ONL ACACTTTTAA CAAATAAAAA (2) TAAATTCACA TAATCAGAAT 15.3 0.0153