Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.214525	Cnot4	CCR4-NOT transcription complex, subunit 4	6	6 B1	53621
Mm.214525	AL118003	expressed sequence AL118003	6		404558
Mm.214525	A230071A22Rik	RIKEN cDNA A230071A22 gene	6		320380
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 10 In Situ Hybridization Images

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SAGE Tags

Total 76 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AGCATTCTGG GAGCCCCTGG (4) GGGGGAAGCA (3) GTTCTTTCCT TGATAAAAGT (4) 34.3 0.0343 Cb medulloblastoma TGATAAAAGT (4) 16.2 0.0162 P8 GC+1d culture AGCATTCTGG GGGGAAAGCA (5) GGGGGAAGCA (3) GTTCTTTCCT TACATCTGTG (3) TGATAAAAGT (4) 45.5 0.0455 P8 GC+SHH+1d culture AGCATTCTGG GAGCCCCTGG (4) GGGGGAAGCA (3) GTTCTTTCCT TGATAAAAGT (4) 55.1 0.0551 3T3 fibroblasts AGCATTCTGG GAGCCCCTGG (4) GGGGAAAGCA (5) TACATCTGTG (3) 24.5 0.0245 P1 cortex AGCATTCTGG GAGCCCCTGG (4) TACATCTGTG (3) TGATAAAAGT (4) 31.7 0.0317 Hypothalamus GGGGGAAGCA (3) GTTCTTTCCT TGATAAAAGT (4) 27.1 0.0271 E12.5 retina AGCATTCTGG GGGGGAAGCA (3) GTTCTTTCCT 15 0.015 E14.5 retina AGCATTCTGG GAGCCCCTGG (4) GGGGGAAGCA (3) GTTCTTTCCT TGATAAAAGT (4) 18.1 0.0181 E16.5 retina AGCATTCTGG GGGGGAAGCA (3) GTTCTTTCCT TGATAAAAGT (4) 14.4 0.0144 E18.5 retina AGCATTCTGG GGGGGAAGCA (3) TGATAAAAGT (4) 21.8 0.0218 P0.5 retina AGCATTCTGG GAGCCCCTGG (4) GGGGGAAGCA (3) 13.8 0.0138 P2.5 retina AGCATTCTGG GAGCCCCTGG (4) GGGGGAAGCA (3) GTTCTTTCCT TACATCTGTG (3) TGATAAAAGT (4) 49.4 0.0494 P4.5 retina AGCATTCTGG GGGGGAAGCA (3) GTTCTTTCCT TGATAAAAGT (4) 35.7 0.0357 P6.5 retina AGCATTCTGG GGGGAAAGCA (5) GGGGGAAGCA (3) GTTCTTTCCT TACATCTGTG (3) TGATAAAAGT (4) 31.6 0.0316 P10.5 crx- retina AGCATTCTGG GGGGGAAGCA (3) TACATCTGTG (3) TGATAAAAGT (4) 27.8 0.0278 P10.5 crx+ retina AGCATTCTGG GGGGGAAGCA (3) GTTCTTTCCT TGATAAAAGT (4) 28.7 0.0287 Adult retinal GGGGAAAGCA (5) GGGGGAAGCA (3) TGATAAAAGT (4) 16.7 0.0167 ONL GAGCCCCTGG (4) GGGGGAAGCA (3) TACATCTGTG (3) 7.6 0.0076