| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | GCTTCTGCAT (2)
| 1.6 | 0.0016 |
| Cb medulloblastoma | GGCTCCTCTG (2)
| 2.3 | 0.0023 |
| P8 GC+1d culture | CATACTAAAG GATACCGTTA GCTTCTGCAT (2)
| 5.7 | 0.0057 |
| P8 GC+SHH+1d culture | GGCATTCTGC (2) GGGGGGGTGG
| 2.4 | 0.0024 |
| 3T3 fibroblasts | GCCTTCCACT GGGGGGGTGG
| 7 | 0.007 |
| P1 cortex | TTCCAGCTGT
| 4.5 | 0.0045 |
| Hypothalamus | GATACCGTTA GGCTCCTCTG (2)
| 3.6 | 0.0036 |
| E12.5 retina | GCCTTCCACT GCTTCTGCAT (2) GGGGGGGTGG TTTTTCAACA (3)
| 7.6 | 0.0076 |
| E14.5 retina | GCTTCTGCAT (2) GGCTCCTCTG (2)
| 7.2 | 0.0072 |
| E16.5 retina | GCTTCTGCAT (2) GGCTCCTCTG (2)
| 5.4 | 0.0054 |
| E18.5 retina | CATACTAAAG
| 1.8 | 0.0018 |
| P0.5 retina | GCTTCTGCAT (2)
| 2 | 0.002 |
| P2.5 retina | GATACCGTTA GCTTCTGCAT (2) TTTTTCAACA (3)
| 5.4 | 0.0054 |
| P6.5 retina | GCTTCTGCAT (2) GGCATTCTGC (2)
| 5 | 0.005 |
| P10.5 crx- retina | CATACTAAAG GCTTCTGCAT (2)
| 3.8 | 0.0038 |
| P10.5 crx+ retina | GCCTTCCACT GCTTCTGCAT (2) TTCCAGCTGT
| 5.7 | 0.0057 |
| Adult retinal | GCTTCTGCAT (2) GGCATTCTGC (2) GGCTCCTCTG (2) TTCCAGCTGT
| 9.4 | 0.0094 |
| ONL | GCTTCTGCAT (2)
| 1.9 | 0.0019 |