Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.215389	Trp53bp1	transformation related protein 53 binding protein 1	2		27223
Gene Ontology	damaged DNA binding | kinetochore | nucleus | protein binding | regulation of transcription, DNA-dependent | transcription factor binding
Human Homolog	TP53BP1[tumor protein p53 binding protein, 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 102 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ATTATTTTTC CCAAACCAAA GACCTTGTAC GTGACTCACA (2) TGCTGAGAAT TGTTGAGAAT 60.4 0.0604 Cb medulloblastoma CCAAACCAAA GGAAAGTTCT GTGACTCACA (2) TGCTGAGAAT TGGTGAGAGG TGTTGAGAAT 106.3 0.1063 P8 GC+1d culture CCAAACCAAA GACCTTGTAC GGAAAGTTCT GTGACTCACA (2) TGCTGAGAAT 63.8 0.0638 P8 GC+SHH+1d culture ATCTCTACTT (2) ATTATTTTTC CCAAACCAAA GACCTTGTAC GTGACTCACA (2) TGCTGAGAAT 66.8 0.0668 3T3 fibroblasts GTGACTCACA (2) TGCTGAGAAT 49 0.049 E15 cortex AGCCAACCCA (2) GTGACTCACA (2) TGCTGAGAAT 69.3 0.0693 P1 cortex ATCTCTACTT (2) GTGACTCACA (2) TGCTGAGAAT TGGTGAGAGG 40.8 0.0408 Hypothalamus CCAAACCAAA GACCTTGTAC GTGACTCACA (2) TAACCCAGGC TGCTGAGAAT TGGTGAGAGG 47 0.047 E12.5 retina AGGGGTCTGT GACCTTGTAC GTGACTCACA (2) TGCTGAGAAT 99.6 0.0996 E14.5 retina AGGGGTCTGT GTGACTCACA (2) TGCTGAGAAT 109.2 0.1092 E16.5 retina ATCTCTACTT (2) GACCTTGTAC GTGACTCACA (2) TGCTGAGAAT 81.5 0.0815 E18.5 retina CCAAACCAAA GACCTTGTAC GTGACTCACA (2) TGCTGAGAAT 116.4 0.1164 P0.5 retina AGGGGTCTGT ATCTCTACTT (2) CCAAACCAAA GACCTTGTAC GTGACTCACA (2) TGCTGAGAAT TGGTGAGAGG 112 0.112 P2.5 retina AGGGGTCTGT ATCTCTACTT (2) GACCTTGTAC GTGACTCACA (2) TGCTGAGAAT TGGTGAGAGG 137.3 0.1373 P4.5 retina ATCTCTACTT (2) CCAAACCAAA GACCTTGTAC GTGACTCACA (2) TGCTGAGAAT 154.5 0.1545 P6.5 retina CCAAACCAAA GACCTTGTAC GGAAAGTTCT GTGACTCACA (2) TGCTGAGAAT TGGTGAGAGG 135.1 0.1351 P10.5 crx- retina AGCCAACCCA (2) CCAAACCAAA GACCTTGTAC GGAAAGTTCT GTGACTCACA (2) TAACCCAGGC TGCTGAGAAT TGTTGAGAAT 98.6 0.0986 P10.5 crx+ retina CCAAACCAAA GACCTTGTAC GGAAAGTTCT GTGACTCACA (2) TGCTGAGAAT TGGTGAGAGG 146 0.146 Adult retinal AGGGGTCTGT CGCATACACA GTGACTCACA (2) TGCTGAGAAT TGGTGAGAGG TGTTGAGAAT 96.3 0.0963 ONL ATCTCTACTT (2) GACCTTGTAC GTGACTCACA (2) TGCTGAGAAT TGGTGAGAGG 97.7 0.0977