| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | GTGTCTGCTC TTAAAAAAAA (2)
| 14.7 | 0.0147 |
| Cb medulloblastoma | TTAAAAAAAA (2)
| 53.2 | 0.0532 |
| P8 GC+1d culture | GCGCAGGCAG TTAAAAAAAA (2)
| 29.6 | 0.0296 |
| P8 GC+SHH+1d culture | GCGCAGGCAG TTAAAAAAAA (2)
| 35.2 | 0.0352 |
| E15 cortex | GCAGCATCCA (2) GCGCAGGCAG TTAAAAAAAA (2)
| 14.7 | 0.0147 |
| P1 cortex | GTGTCTGCTC TTAAAAAAAA (2)
| 18.1 | 0.0181 |
| Hypothalamus | GCAGCATCCA (2) TTAAAAAAAA (2)
| 23.5 | 0.0235 |
| E12.5 retina | GCAGCATCCA (2) GTGTCTGCTC TTAAAAAAAA (2)
| 15.1 | 0.0151 |
| E14.5 retina | GCAGCATCCA (2) GCGCAGGCAG TTAAAAAAAA (2)
| 29.1 | 0.0291 |
| E16.5 retina | GCAGCATCCA (2) GTGTCTGCTC TTAAAAAAAA (2)
| 23.5 | 0.0235 |
| E18.5 retina | GCAGCATCCA (2) TTAAAAAAAA (2)
| 52.7 | 0.0527 |
| P0.5 retina | GCAGCATCCA (2) GTGTCTGCTC TTAAAAAAAA (2)
| 21.7 | 0.0217 |
| P2.5 retina | TTAAAAAAAA (2)
| 40.5 | 0.0405 |
| P4.5 retina | GCAGCATCCA (2) TTAAAAAAAA (2)
| 51.6 | 0.0516 |
| P6.5 retina | TTAAAAAAAA (2)
| 16.7 | 0.0167 |
| P10.5 crx- retina | GCAGCATCCA (2) TTAAAAAAAA (2)
| 20.4 | 0.0204 |
| P10.5 crx+ retina | GCAGCATCCA (2) GTGTCTGCTC TTAAAAAAAA (2)
| 11.5 | 0.0115 |
| Adult retinal | TTAAAAAAAA (2)
| 7.4 | 0.0074 |
| ONL | GCAGCATCCA (2) TTAAAAAAAA (2)
| 9.6 | 0.0096 |