Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.21662	Rpgrip1	retinitis pigmentosa GTPase regulator interacting protein 1	14	14 C1	77945
Gene Ontology	axoneme | cilium | eye photoreceptor cell development | protein binding | vision
Human Homolog	RPGRIP1[retinitis pigmentosa GTPase regulator interacting protein 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 96 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ACCATTCTTC (3) CACATTCTGG GTGGAAGAGA (2) 4.8 0.0048 Cb medulloblastoma ACCATTCTTC (3) CACATTCTGG 6.9 0.0069 P8 GC+1d culture ACCATTCTTC (3) GATCTCAAAG (3) TTGACTCCTT 4.5 0.0045 P8 GC+SHH+1d culture ACCATTCTTC (3) CACATTCTGG GATCTCAAAG (3) 9.4 0.0094 E15 cortex GATCTCAAAG (3) 4.9 0.0049 P1 cortex ACCATTCTTC (3) CACATTCTGG TTGACTCCTT 18.1 0.0181 Hypothalamus CCATAAAAAA (2) GCTGCATAGC (3) GGAGGCCTCC 5.4 0.0054 E12.5 retina ACCATTCTTC (3) GCTGCATAGC (3) 5.7 0.0057 E14.5 retina ACCATTCTTC (3) GCTTACCTTG (3) TCTGATGAGA 5.4 0.0054 E16.5 retina CCATAAACCT GCTGCATAGC (3) 7.2 0.0072 E18.5 retina CACATTCTGG CCATAAAAAA (2) GCTGCATAGC (3) 9.1 0.0091 P0.5 retina ACTTTTCTCA CACATTCTGG CCATAAACCT GCTGCATAGC (3) TCTGATGAGA 15.8 0.0158 P2.5 retina ACCATTCTTC (3) CACATTCTGG CCATAAAAAA (2) CCATAAACCT CCCCGGGTCA CTTCAGCCTT (2) GATCTCAAAG (3) GCTGCATAGC (3) GCTTACCTTG (3) TTGACTCCTT 49.4 0.0494 P4.5 retina ACCATTCTTC (3) AGGCAAGAAA CACATTCTGG CCATAAACCT CCCCGGGTCA CTTCAGCCTT (2) GATCTCAAAG (3) GCTGCATAGC (3) GCTTAGACTC GGAGGCCTCC TTGACTCCTT 91.3 0.0913 P6.5 retina ACCATTCTTC (3) ACTTTTCTCA CACATTCTGG CCATAAAAAA (2) CCATAAACCT CTTCAGCCTT (2) GCTGCATAGC (3) GCTTACCTTG (3) GTGGAAGAGA (2) 76.7 0.0767 P10.5 crx- retina ACCATTCTTC (3) ACTTTTCTCA AGGCAAGAAA CCATAAAAAA (2) GATCTCAAAG (3) GCTGCATAGC (3) GCTTACCTTG (3) TCTGATGAGA 28.1 0.0281 P10.5 crx+ retina ACCATTCTTC (3) ACTTTTCTCA AGGCAAGAAA CCATAAAAAA (2) CCATAAACCT CCCCGGGTCA GCTGCATAGC (3) GCTTAGACTC 111.3 0.1113 Adult retinal ACCATTCTTC (3) ACTTTTCTCA CACATTCTGG CCATAAAAAA (2) CCATAAACCT CTTCAGCCTT (2) GATCTCAAAG (3) GCTGCATAGC (3) 44.7 0.0447 ONL ACCATTCTTC (3) ACTTTTCTCA CACATTCTGG CCATAAAAAA (2) CCATAAACCT CTTCAGCCTT (2) GCTGCATAGC (3) GCTTAGACTC GTGGAAGAGA (2) 43.9 0.0439