Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.21671
Eif3s9
eukaryotic translation initiation factor 3, subunit 9 (eta)
5
5 82.0 cM
27979
Mm.21671
D12Mgi40
DNA Segment, Chr 12, Mouse Genome Informatics 40
12
104925
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 35 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GCCTCCCAAT
GGCCTTTTGG
(
2
)
GGGTTTCCAG
(
2
)
11.5
0.0115
Cb medulloblastoma
GGGTTTCCAG
(
2
)
2.3
0.0023
P8 GC+1d culture
GGGTTTCCAG
(
2
)
12.6
0.0126
P8 GC+SHH+1d culture
GCCTCCCAAT
GGGTTTCCAG
(
2
)
5.9
0.0059
3T3 fibroblasts
GACAGCAGCA
(
2
)
GGGTTTCCAG
(
2
)
10.5
0.0105
E15 cortex
CCCCCCTTCC
GACAGGAGGA
GGGTTTCCAG
(
2
)
14.7
0.0147
P1 cortex
GGGTTTCCAG
(
2
)
4.5
0.0045
Hypothalamus
GGGTTTCCAG
(
2
)
1.8
0.0018
E12.5 retina
GCCTCCCAAT
GGGTTTCCAG
(
2
)
11.3
0.0113
E14.5 retina
GACAGCAGCA
(
2
)
GGGTTTCCAG
(
2
)
7.3
0.0073
E16.5 retina
GGGTTTCCAG
(
2
)
10.9
0.0109
E18.5 retina
GGGTTTCCAG
(
2
)
3.6
0.0036
P0.5 retina
GGGTTTCCAG
(
2
)
3.9
0.0039
P2.5 retina
CCCCCCTTCC
GACAGGAGGA
GCCTCCCAAT
GGGTTTCCAG
(
2
)
14.1
0.0141
P4.5 retina
GCCTCCCAAT
GGGTTTCCAG
(
2
)
11.9
0.0119
P6.5 retina
GGGTTTCCAG
(
2
)
6.7
0.0067
P10.5 crx- retina
GGGTTTCCAG
(
2
)
1.9
0.0019
P10.5 crx+ retina
GCCTCCCAAT
GGCCTTTTGG
(
2
)
GGGTTTCCAG
(
2
)
5.7
0.0057
Adult retinal
GGGTTTCCAG
(
2
)
1.9
0.0019
ONL
GACAGCAGCA
(
2
)
GACAGGAGGA
3.8
0.0038
