| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | ACCTAAGGTC GTTCTGGTGG (3) TTAGTGTGGG
| 6.5 | 0.0065 |
| Cb medulloblastoma | ACCTAAGGTC
| 2.3 | 0.0023 |
| P8 GC+1d culture | ACCTAAGGTC GAGAAGCTGA (2) TCTCAGAAAA TTAGTGTGGG
| 15.9 | 0.0159 |
| P8 GC+SHH+1d culture | ACCTAAGGTC TTAGTGTGGG
| 10.6 | 0.0106 |
| 3T3 fibroblasts | TTAGTGTGGG
| 3.5 | 0.0035 |
| E15 cortex | GAGGCACTTC
| 4.9 | 0.0049 |
| P1 cortex | GAGAAGCTGA (2) TTAGTGTGGG
| 9 | 0.009 |
| Hypothalamus | ACCTAAGGTC GAGAAGCTGA (2) TCTCAGAAAA
| 9 | 0.009 |
| E12.5 retina | GTTCTGGTGG (3)
| 1.9 | 0.0019 |
| E14.5 retina | ACCTGTCTTC TCTCAGAAAA
| 5.4 | 0.0054 |
| E16.5 retina | ATTACGCCAA GAGGCACTTC TCTCAGAAAA TTAGTGTGGG
| 10.8 | 0.0108 |
| E18.5 retina | ACCTGTCTTC TCTCAGAAAA TTAGTGTGGG
| 14.5 | 0.0145 |
| P0.5 retina | ACCTGTCTTC ATTACGCCAA GTTCTGGTGG (3) TTAGTGTGGG
| 13.8 | 0.0138 |
| P2.5 retina | GTTCTGGTGG (3) TTAGTGTGGG
| 7.1 | 0.0071 |
| P4.5 retina | ACCTGTCTTC TTAGTGTGGG
| 6 | 0.006 |
| P6.5 retina | ACCTGTCTTC GTTCTGGTGG (3) TTAGTGTGGG
| 10.1 | 0.0101 |
| P10.5 crx- retina | GTTCTGGTGG (3) TTAGTGTGGG
| 5.6 | 0.0056 |
| P10.5 crx+ retina | GAGAAGCTGA (2) GAGGCACTTC TCTCAGAAAA TTAGTGTGGG
| 11.5 | 0.0115 |
| Adult retinal | ACCTAAGGTC ATTACGCCAA GTTCTGGTGG (3) TTAGTGTGGG
| 13.1 | 0.0131 |
| ONL | GAGGCACTTC GTTCTGGTGG (3) TCTCAGAAAA TTAGTGTGGG
| 11.4 | 0.0114 |