| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AAGGTGCTCA (3) GTGTCTCACA TAAAAAAAAA (3)
| 50.5 | 0.0505 |
| Cb medulloblastoma | GATCTTAAAC GTGTCTCACA TAAAAAAAAA (3)
| 115.6 | 0.1156 |
| P8 GC+1d culture | AAGGTGCTCA (3) GATCTTAAAC GTGTCTCACA TAAAAAAAAA (3) TCAGAAAGTC
| 71.8 | 0.0718 |
| P8 GC+SHH+1d culture | AAGGTGCTCA (3) GTGTCTCACA TAAAAAAAAA (3)
| 98.4 | 0.0984 |
| 3T3 fibroblasts | GTGTCTCACA TAAAAAAAAA (3)
| 10.5 | 0.0105 |
| E15 cortex | GTGTCTCACA TAAAAAAAAA (3)
| 14.8 | 0.0148 |
| P1 cortex | GTGTCTCACA TAAAAAAAAA (3)
| 63.6 | 0.0636 |
| Hypothalamus | AAGGTGCTCA (3) GTGTCTCACA TAAAAAAAAA (3)
| 38 | 0.038 |
| E12.5 retina | TAAAAAAAAA (3)
| 24.4 | 0.0244 |
| E14.5 retina | AAGGTGCTCA (3) GTGTCTCACA TAAAAAAAAA (3) TCAGAAAGTC TCCTGGATCA
| 61.9 | 0.0619 |
| E16.5 retina | AAGGTGCTCA (3) GATCTTAAAC GTGTCTCACA TAAAAAAAAA (3)
| 39.7 | 0.0397 |
| E18.5 retina | GATCTTAAAC GTGTCTCACA TAAAAAAAAA (3)
| 116.4 | 0.1164 |
| P0.5 retina | AAGGTGCTCA (3) GATCTTAAAC GTGTCTCACA TAAAAAAAAA (3)
| 47.2 | 0.0472 |
| P2.5 retina | AAGGTGCTCA (3) GATCTTAAAC GTGTCTCACA TAAAAAAAAA (3) TCCTGGATCA
| 82.8 | 0.0828 |
| P4.5 retina | GATCTTAAAC GGACTGAGGG (3) GTGTCTCACA TAAAAAAAAA (3) TCAGAAAGTC
| 132.8 | 0.1328 |
| P6.5 retina | AAGGTGCTCA (3) GTGTCTCACA TAAAAAAAAA (3)
| 73.4 | 0.0734 |
| P10.5 crx- retina | GGACTGAGGG (3) GTGTCTCACA TAAAAAAAAA (3) TCCTGGATCA
| 16.8 | 0.0168 |
| P10.5 crx+ retina | GTGTCTCACA TAAAAAAAAA (3)
| 30.8 | 0.0308 |
| Adult retinal | GTGTCTCACA TAAAAAAAAA (3)
| 22.2 | 0.0222 |
| ONL | GTGTCTCACA TAAAAAAAAA (3)
| 38.3 | 0.0383 |