| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | GTCTACAGAG (2) TGGGATCTGA (3) TGTGTCTGGT
| 9.8 | 0.0098 |
| Cb medulloblastoma | GTCTACAGAG (2) TGGGATCTGA (3)
| 4.6 | 0.0046 |
| P8 GC+1d culture | CAGGAGCATA GAAGATGCTC GTCTACAGAG (2) TGACCAGCTG
| 10.2 | 0.0102 |
| P8 GC+SHH+1d culture | GTCTACAGAG (2)
| 2.3 | 0.0023 |
| 3T3 fibroblasts | GTATGGATTT GTCTACAGAG (2) TGTGTCTGGT
| 10.5 | 0.0105 |
| E15 cortex | GTCTACAGAG (2)
| 4.9 | 0.0049 |
| P1 cortex | GAAGATGCTC GTCTACAGAG (2)
| 18.1 | 0.0181 |
| Hypothalamus | GAAGATGCTC GTATGGATTT GTCTACAGAG (2) TGACCAGCTG TGGGATCTGA (3)
| 14.4 | 0.0144 |
| E12.5 retina | TGACCAGCTG
| 1.9 | 0.0019 |
| E14.5 retina | GTCTACAGAG (2) TGACCAGCTG
| 10.9 | 0.0109 |
| E16.5 retina | GTCTACAGAG (2) TGACCAGCTG
| 9 | 0.009 |
| E18.5 retina | CAGGAGCATA GTCTACAGAG (2) TGACCAGCTG TGTGTCTGGT
| 10.9 | 0.0109 |
| P0.5 retina | GTCTACAGAG (2) TGACCAGCTG
| 7.8 | 0.0078 |
| P2.5 retina | GAAGATGCTC TGACCAGCTG
| 5.3 | 0.0053 |
| P4.5 retina | GTCTACAGAG (2)
| 7.9 | 0.0079 |
| P6.5 retina | CAGGAGCATA GAAGATGCTC GTCTACAGAG (2) TGACCAGCTG
| 15.1 | 0.0151 |
| P10.5 crx- retina | GTCTACAGAG (2) TGACCAGCTG
| 11.1 | 0.0111 |
| P10.5 crx+ retina | GTCTACAGAG (2) TGACCAGCTG
| 11.5 | 0.0115 |
| Adult retinal | CAGGAGCATA GTCTACAGAG (2) TGACCAGCTG
| 9.3 | 0.0093 |
| ONL | GTCTACAGAG (2)
| 11.5 | 0.0115 |