Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.218747	Scrt1	scratch homolog 1, zinc finger protein (Drosophila)	15		170729
Gene Ontology	DNA binding | nucleic acid binding | nucleus | regulation of transcription, DNA-dependent | zinc ion binding
Human Homolog	SCRT1[scratch homolog 1, zinc finger protein (Drosophila)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 50 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GGCCCCCTCC TTTTTTTTTT (2) 6.5 0.0065 Cb medulloblastoma GGCCCCCTCC GGCCCCTCCC (2) TTTTTTTTTT (2) 9.2 0.0092 P8 GC+1d culture CACACGCACA (2) GGCCCCCTCC GGCCCCTCCC (2) TTTTTTTTTT (2) 23.9 0.0239 P8 GC+SHH+1d culture GGCCCCCTCC GGCCCCTCCC (2) TTTTTTTTTT (2) 15.2 0.0152 3T3 fibroblasts GGCCCCTCCC (2) 3.5 0.0035 E15 cortex GGCCCCCTCC GGCCCCTCCC (2) TTTTTTTTTT (2) 29.6 0.0296 P1 cortex GGCCCCTCCC (2) TTTTTTTTTT (2) 9 0.009 Hypothalamus CACACGCACA (2) TTTTTTTTTT (2) 9 0.009 E12.5 retina TTTTTTTTTT (2) 7.5 0.0075 E14.5 retina GGCCCCCTCC TTTTTTTTTT (2) 25.5 0.0255 E16.5 retina GGCCCCTCCC (2) TTTTTTTTTT (2) 7.2 0.0072 E18.5 retina GGCCCCTCCC (2) TTTTTTTTTT (2) 12.7 0.0127 P0.5 retina CACACGCACA (2) GGCCCCCTCC GGCCCCTCCC (2) TTTTTTTTTT (2) 21.6 0.0216 P2.5 retina GGCCCCCTCC GGCCCCTCCC (2) TTTTTTTTTT (2) 15.8 0.0158 P4.5 retina GGCCCCCTCC GGCCCCTCCC (2) TTTTTTTTTT (2) 15.9 0.0159 P6.5 retina GGCCCCTCCC (2) TTTTTTTTTT (2) 10 0.01 P10.5 crx- retina GGCCCCCTCC GGCCCCTCCC (2) 13 0.013 P10.5 crx+ retina CACACGCACA (2) GGCCCCCTCC GGCCCCTCCC (2) TTTTTTTTTT (2) 9.5 0.0095 Adult retinal CACACGCACA (2) GGCCCCCTCC TTTTTTTTTT (2) 16.7 0.0167 ONL CACACGCACA (2) TTTTTTTTTT (2) 9.5 0.0095