Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.218891	Catnal1	catenin alpha-like 1	4		54366
Gene Ontology	cytosol | molecular_function unknown | Rho protein signal transduction
Human Homolog	CTNNAL1[catenin (cadherin-associated protein), alpha-like 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 29 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGATAATATA TGGAGGACTT 6.6 0.0066 Cb medulloblastoma TGGAGGACTT 2.3 0.0023 P8 GC+1d culture ATCTTTAATA TGGAGGACTT 2.2 0.0022 P8 GC+SHH+1d culture TGGGTTTTAA (4) 1.2 0.0012 3T3 fibroblasts TGGCACAGCT 3.5 0.0035 P1 cortex TGGCACAGCT TTGCTATGGT (2) 9 0.009 Hypothalamus TGATAATATA 3.6 0.0036 E12.5 retina TGATAATATA 3.8 0.0038 E14.5 retina TGATAATATA 1.8 0.0018 E16.5 retina ATCTTTAATA TTGCTATGGT (2) 7.2 0.0072 E18.5 retina TGATAATATA TGGGTTTTAA (4) 5.4 0.0054 P0.5 retina TGGAGGACTT 2 0.002 P2.5 retina TGATAATATA TGGGTTTTAA (4) TTGCTATGGT (2) 7.1 0.0071 P4.5 retina TGATAATATA TGGCACAGCT 4 0.004 P6.5 retina ATCTTTAATA TTGCTATGGT (2) 5 0.005 P10.5 crx- retina ATCTTTAATA 1.9 0.0019 P10.5 crx+ retina TGATAATATA 3.8 0.0038 Adult retinal TGATAATATA TTGCTATGGT (2) 3.8 0.0038 ONL TGATAATATA 1.9 0.0019