| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AAAGTTATTT (3) CACAGGGAGG (4)
| 3.2 | 0.0032 |
| Cb medulloblastoma | CAGTGGAAAG CTGTTTTGTG (3) GAGAGGTGAT
| 6.9 | 0.0069 |
| P8 GC+1d culture | AAAGTTATTT (3) AAGTTTATAA (2) CACAGGGAGG (4) GAGAGGTGAT GTGGCCGCAG (3)
| 6.7 | 0.0067 |
| P8 GC+SHH+1d culture | AAAGTTATTT (3) CACTGAAAAA (3) GTAACACATT (2)
| 4.7 | 0.0047 |
| 3T3 fibroblasts | CACAGGGAGG (4) CAGTGGAAAG GTGGCCGCAG (3)
| 10.5 | 0.0105 |
| Hypothalamus | AAGTTTATAA (2) CAGTGGAAAG GAGAGGTGAT
| 7.2 | 0.0072 |
| E12.5 retina | AAAGTTATTT (3) AAATATGTAA (2) AAGTTTATAA (2) CAGTGGAAAG CAGTGGGAAG
| 11.4 | 0.0114 |
| E14.5 retina | AAAGTTATTT (3) AAGTTTATAA (2) CAGTGGGAAG GAGAGGTGAT
| 9 | 0.009 |
| E16.5 retina | AAATATGTAA (2) CACAGGGAGG (4) CTGTTTTGTG (3)
| 5.4 | 0.0054 |
| E18.5 retina | AAAGTTATTT (3) CAGTGGGAAG
| 3.6 | 0.0036 |
| P0.5 retina | AAAGTTATTT (3) GAGAGGTGAT
| 4 | 0.004 |
| P2.5 retina | AAATATGTAA (2) AAGTTTATAA (2) CACTGAAAAA (3) GAGAGGTGAT
| 7.2 | 0.0072 |
| P4.5 retina | CACAGGGAGG (4) CACTGAAAAA (3) CAGTGGGAAG GAGAGGTGAT GTAACACATT (2) GTGGCCGCAG (3)
| 14 | 0.014 |
| P6.5 retina | AAATATGTAA (2) CAGTGGAAAG
| 10 | 0.01 |
| P10.5 crx- retina | AAGTTTATAA (2) CAGTGGAAAG GAGAGGTGAT TTTTCAAAAC
| 9.4 | 0.0094 |
| P10.5 crx+ retina | CAGTGGAAAG GAGAGGTGAT
| 3.8 | 0.0038 |
| Adult retinal | CAGTGGAAAG GAGAGGTGAT TTTTCAAAAC
| 16.7 | 0.0167 |
| ONL | CAGTGGAAAG CTGTTTTGTG (3) GAGAGGTGAT
| 7.6 | 0.0076 |