| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AAGAGCCATC (3) AGTTCACCTG (2) TCTGTGGCCC (3)
| 6.5 | 0.0065 |
| Cb medulloblastoma | AAGAGCCATC (3) AGTTCACCTG (2) CTCAGAAGAT (3)
| 13.8 | 0.0138 |
| P8 GC+1d culture | AGTTCACCTG (2)
| 1.1 | 0.0011 |
| P8 GC+SHH+1d culture | AAGAGCCATC (3) AGTTCACCTG (2) CTCAGAAGAT (3) TGACGCTCTG (3)
| 5.9 | 0.0059 |
| 3T3 fibroblasts | AAGAGCCATC (3) AGTTCACCTG (2)
| 14 | 0.014 |
| P1 cortex | AGTTCACCTG (2) TCTGTGGCCC (3)
| 9 | 0.009 |
| Hypothalamus | AAGAGCCATC (3) AGTTCACCTG (2) CTCAGAAGAT (3) TGACGCTCTG (3)
| 7.2 | 0.0072 |
| E12.5 retina | AGTTCACCTG (2)
| 5.6 | 0.0056 |
| E14.5 retina | AGTTCACCTG (2)
| 3.6 | 0.0036 |
| E16.5 retina | AAGAGCCATC (3) AGTTCACCTG (2) CCGCTCCCCA (2)
| 10.8 | 0.0108 |
| E18.5 retina | AGTTCACCTG (2) CTCAGAAGAT (3)
| 5.4 | 0.0054 |
| P0.5 retina | AGTTCACCTG (2)
| 3.9 | 0.0039 |
| P2.5 retina | AGTTCACCTG (2)
| 8.8 | 0.0088 |
| P4.5 retina | AAGAGCCATC (3) AGTTCACCTG (2) CTCAGAAGAT (3)
| 13.9 | 0.0139 |
| P6.5 retina | AAGAGCCATC (3) AGTTCACCTG (2)
| 20 | 0.02 |
| P10.5 crx- retina | AAGAGCCATC (3) AGTTCACCTG (2) CTCAGAAGAT (3)
| 7.5 | 0.0075 |
| P10.5 crx+ retina | AAGAGCCATC (3) AGTTCACCTG (2) CCGCTCCCCA (2) CTCAGAAGAT (3)
| 19.1 | 0.0191 |
| Adult retinal | AAGAGCCATC (3) AGTTCACCTG (2) TCTGTGGCCC (3)
| 11.2 | 0.0112 |
| ONL | AGTTCACCTG (2) CCGCTCCCCA (2)
| 5.7 | 0.0057 |