Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.219461	Fgd1	FYVE, RhoGEF and PH domain containing 1	X	X 64.0 cM	14163
Gene Ontology	cytoplasm | cytoskeleton organization and biogenesis | Golgi apparatus | guanyl-nucleotide exchange factor activity | intracellular signaling cascade | lamellipodium | protein binding | ruffles | zinc ion binding
Human Homolog	FGD1[FYVE, RhoGEF and PH domain containing 1 (faciogenital dysplasia)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 23 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GGTTTTTTAA (2) GTCCTAAAAA (2) 3.2 0.0032 P8 GC+SHH+1d culture AAGTACAGAA 1.2 0.0012 3T3 fibroblasts TGAAGACACT 3.5 0.0035 P1 cortex TGAAGACACT 13.6 0.0136 Hypothalamus AAGTACAGAA 1.8 0.0018 E12.5 retina GACCTCATTC (2) GGTTTTTTAA (2) 5.7 0.0057 E14.5 retina AAGTACAGAA GGTTTTTTAA (2) 5.4 0.0054 E16.5 retina GGTTTTTTAA (2) 1.8 0.0018 E18.5 retina GGTTTTTTAA (2) 3.6 0.0036 P2.5 retina GACCTCATTC (2) GTCCTAAAAA (2) TGAAGACACT 5.4 0.0054 P4.5 retina AAGTACAGAA 2 0.002 P6.5 retina GGTTTTTTAA (2) 1.7 0.0017 P10.5 crx- retina GTCCTAAAAA (2) 3.7 0.0037 P10.5 crx+ retina GTCCTAAAAA (2) 1.9 0.0019 Adult retinal GACCTCATTC (2) 3.7 0.0037 ONL AAGTACAGAA GTCCTAAAAA (2) TGAAGACACT 9.5 0.0095