Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.219648	D18Ertd693e	DNA segment, Chr 18, ERATO Doi 693, expressed	18	18 3.0 cM	52519
Mm.219648	Thoc1	THO complex 1	18		225160
Gene Ontology	apoptosis | DNA binding | mRNA processing | mRNA-nucleus export | nuclear mRNA splicing, via spliceosome | nucleus | protein binding | regulation of apoptosis | RNA binding | signal transduction | structural molecule activity | transport
Human Homolog	THOC1[THO complex 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 65 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAATTCCTTT AACTCCTGCT (2) ACTTTACAAT (2) CAGGAAACTA (2) 11.4 0.0114 Cb medulloblastoma ACTTTACAAT (2) CAACAACTGA (2) 6.9 0.0069 P8 GC+1d culture ACTTTACAAT (2) ATTGAAAAAA (2) CAACAACTGA (2) CAGGAAACTA (2) GGTTTTGTAG 10.2 0.0102 P8 GC+SHH+1d culture AACTCCTGCT (2) ACTTTACAAT (2) ATGTTTGTGA CAACAACTGA (2) 10.6 0.0106 E15 cortex GAGGATCTAA 4.9 0.0049 P1 cortex AAATTCCTTT 9.1 0.0091 Hypothalamus ACTTTACAAT (2) ATGTTTGTGA CAACAACTGA (2) CAGGAAACTA (2) TTTTCACTGT 14.4 0.0144 E12.5 retina ACTTTACAAT (2) CAACAACTGA (2) GGTTTTGTAG 13.2 0.0132 E14.5 retina ACTTTACAAT (2) ATGTTTGTGA CAACAACTGA (2) CAGGAAACTA (2) GGTTTTGTAG TTTTCACTGT 18.1 0.0181 E16.5 retina ACTTTACAAT (2) CAACAACTGA (2) GAGGATCTAA 12.6 0.0126 E18.5 retina ATTGAAAAAA (2) CAACAACTGA (2) TTTTCACTGT 5.4 0.0054 P0.5 retina ACTTTACAAT (2) ATGTTTGTGA ATTGAAAAAA (2) CAACAACTGA (2) 11.9 0.0119 P2.5 retina ATGTTTGTGA CAACAACTGA (2) TTTTCACTGT 10.6 0.0106 P4.5 retina ACTTTACAAT (2) GAGGATCTAA GGTTTTGTAG 9.9 0.0099 P6.5 retina ACTTTACAAT (2) ATGTTTGTGA CAACAACTGA (2) CAGGAAACTA (2) GGTTTTGTAG 11.7 0.0117 P10.5 crx- retina ACTTTACAAT (2) ATTGAAAAAA (2) CAACAACTGA (2) TTTTCACTGT 15 0.015 P10.5 crx+ retina ACTTTACAAT (2) ATGTTTGTGA CAACAACTGA (2) CAGGAAACTA (2) 15.3 0.0153 Adult retinal ACTTTACAAT (2) CAACAACTGA (2) 3.8 0.0038 ONL ACTTTACAAT (2) GGTTTTGTAG TTTTCACTGT 7.6 0.0076