| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AGGAAAAAAA (2) AGGACACCGC GACCCACCTA
| 19.6 | 0.0196 |
| Cb medulloblastoma | AGGAAAAAAA (2) AGGACACCGC
| 13.8 | 0.0138 |
| P8 GC+1d culture | AGGAAAAAAA (2) AGGACACCGC GACCCACCTA
| 25.2 | 0.0252 |
| P8 GC+SHH+1d culture | AGGAAAAAAA (2) AGGACACCGC GAACACGGGA GACCCACCTA GGCCCGGCAG (3) GGGGAGGGAA (2)
| 32.8 | 0.0328 |
| 3T3 fibroblasts | AGGACACCGC TCGGCAGGGG
| 7 | 0.007 |
| E15 cortex | AGGAAAAAAA (2) AGGACACCGC GGGGAGGGAA (2)
| 39.5 | 0.0395 |
| P1 cortex | AGGACACCGC AGGACCCCGC
| 9 | 0.009 |
| Hypothalamus | AGGAAAAAAA (2) GACCCACCTA GAGTACCTGG (2) GGCCCGGCAG (3)
| 9 | 0.009 |
| E12.5 retina | AGGAAAAAAA (2) AGGACACCGC GAACACGGGA GACCCACCTA
| 26.4 | 0.0264 |
| E14.5 retina | AGGAAAAAAA (2) AGGACACCGC AGGACCCCGC GAACACGGGA GACCCACCTA GAGTACCTGG (2) GGAGGGGCAC
| 38.1 | 0.0381 |
| E16.5 retina | AGGAAAAAAA (2) AGGACACCGC GAACACGGGA GGAGGGGCAC
| 34.4 | 0.0344 |
| E18.5 retina | AGGAAAAAAA (2) AGGACACCGC GGAGGGGCAC
| 54.6 | 0.0546 |
| P0.5 retina | AGGACACCGC GAACACGGGA GACCCACCTA TCGGCAGGGG
| 21.7 | 0.0217 |
| P2.5 retina | AGGAAAAAAA (2) AGGACACCGC GAACACGGGA
| 44 | 0.044 |
| P4.5 retina | AGGAAAAAAA (2) AGGACACCGC AGGACCCCGC GAACACGGGA GAGTACCTGG (2)
| 51.6 | 0.0516 |
| P6.5 retina | AGGAAAAAAA (2) AGGACACCGC AGGACCCCGC GGGGAGGGAA (2) TCGGCAGGGG
| 40.1 | 0.0401 |
| P10.5 crx- retina | AGGAAAAAAA (2) AGGACACCGC GAACACGGGA GGCCCGGCAG (3)
| 18.7 | 0.0187 |
| P10.5 crx+ retina | AGGAAAAAAA (2) AGGACACCGC
| 30.8 | 0.0308 |
| Adult retinal | AGGAAAAAAA (2) AGGACACCGC AGGACCCCGC GAACACGGGA GGCCCGGCAG (3)
| 26.1 | 0.0261 |
| ONL | AGGAAAAAAA (2) AGGACACCGC GAACACGGGA
| 21 | 0.021 |