| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | GCTTGACAGA TAACAAAGGA TCTGGCAGAG (2) TGGACTGGTC (2)
| 9.8 | 0.0098 |
| Cb medulloblastoma | CTTTCTTCTC (2) GCTTGACAGA TAACAAAGGA TCTGGCAGAG (2)
| 23.1 | 0.0231 |
| P8 GC+1d culture | AACCACGCAA CACCACCTAC CTTTCTTCTC (2) TAACAAAGGA TCAGCTTCCC (2) TGGACTGGTC (2)
| 12.3 | 0.0123 |
| P8 GC+SHH+1d culture | AACCACGCAA GATGGCAATG TAACAAAGGA
| 9.4 | 0.0094 |
| 3T3 fibroblasts | TAACAAAGGA TCTGGCAGAG (2)
| 14 | 0.014 |
| P1 cortex | AACCACGCAA TAACAAAGGA
| 9 | 0.009 |
| Hypothalamus | AACCACGCAA CACCACCTAC TAACAAAGGA TCTGGCAGAG (2)
| 18.1 | 0.0181 |
| E12.5 retina | AACCACGCAA CTTTCTTCTC (2) TAACAAAGGA TCTGGCAGAG (2)
| 15.1 | 0.0151 |
| E14.5 retina | TAACAAAGGA
| 9.1 | 0.0091 |
| E16.5 retina | TAACAAAGGA
| 5.4 | 0.0054 |
| E18.5 retina | TAACAAAGGA
| 3.6 | 0.0036 |
| P0.5 retina | AACCACGCAA CTTTCTTCTC (2) TAACAAAGGA TGGACTGGTC (2)
| 15.8 | 0.0158 |
| P2.5 retina | TAACAAAGGA TCAGCTTCCC (2)
| 10.6 | 0.0106 |
| P4.5 retina | TAACAAAGGA TCAGCTTCCC (2) TCTGGCAGAG (2)
| 8 | 0.008 |
| P6.5 retina | GATGGCAATG TAACAAAGGA TGGACTGGTC (2)
| 11.7 | 0.0117 |
| P10.5 crx- retina | AACCACGCAA GCTTGACAGA TAACAAAGGA
| 24.2 | 0.0242 |
| P10.5 crx+ retina | AACCACGCAA GATGGCAATG TAACAAAGGA TCTGGCAGAG (2)
| 21.1 | 0.0211 |
| Adult retinal | CACCACCTAC TAACAAAGGA
| 14.8 | 0.0148 |
| ONL | AACCACGCAA CTTTCTTCTC (2) TAACAAAGGA
| 11.5 | 0.0115 |