| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | TCTTATTTTT
| 3.3 | 0.0033 |
| Cb medulloblastoma | GCTGCCCAGC
| 2.3 | 0.0023 |
| P8 GC+1d culture | GAGTCTCCTG (3) GCTGCCCAGC TCTTATTTTT
| 3.3 | 0.0033 |
| P8 GC+SHH+1d culture | CCCCCCATCC (4) GAGTCTCCTG (3) TCTTATTTTT
| 7.1 | 0.0071 |
| E15 cortex | GAGTCTCCTG (3)
| 4.9 | 0.0049 |
| P1 cortex | CCATACTGTT
| 4.5 | 0.0045 |
| Hypothalamus | CCATACTGTT
| 1.8 | 0.0018 |
| E12.5 retina | GAGTCTCCTG (3) GCTGCCCAGC TCTTATTTTT
| 11.3 | 0.0113 |
| E14.5 retina | CCCCCCATCC (4) GAGTCTCCTG (3) GCTGCCCAGC
| 7.2 | 0.0072 |
| E16.5 retina | CCATACTGTT CCCCCCATCC (4)
| 3.6 | 0.0036 |
| E18.5 retina | GAGTCTCCTG (3)
| 9.1 | 0.0091 |
| P0.5 retina | GAGTCTCCTG (3)
| 7.9 | 0.0079 |
| P2.5 retina | CCCCCCATCC (4) GAGTCTCCTG (3) GCTGCCCAGC TCTTATTTTT
| 12.4 | 0.0124 |
| P4.5 retina | CCCCCCATCC (4) TCTTATTTTT
| 6 | 0.006 |
| P6.5 retina | GAGTCTCCTG (3)
| 5 | 0.005 |
| P10.5 crx- retina | CCCCCCATCC (4) GAGTCTCCTG (3)
| 7.5 | 0.0075 |
| P10.5 crx+ retina | CCCCCCATCC (4) GAGTCTCCTG (3) GCTGCCCAGC
| 9.5 | 0.0095 |
| Adult retinal | CCCCCCATCC (4) GAGTCTCCTG (3)
| 7.4 | 0.0074 |
| ONL | GAGTCTCCTG (3)
| 1.9 | 0.0019 |