| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AAAAAAAAAA (2) AAAAATAAAA (3) AAAATAAAAA AAATAAAAAA (2) AAGAAAAAAA (3) GATCCCAAAT (4)
| 239.9 | 0.2399 |
| Cb medulloblastoma | AAAAAAAAAA (2) AAAAATAAAA (3) AAAATAAAAA AAATAAAAAA (2) AAGAAAAAAA (3) GATCCCAAAT (4) GTTTAAAATA (2)
| 850.9 | 0.8509 |
| P8 GC+1d culture | AAAAAAAAAA (2) AAAAATAAAA (3) AAAATAAAAA AAGAAAAAAA (3) GATCCCAAAT (4) GTTTAAAATA (2)
| 234 | 0.234 |
| P8 GC+SHH+1d culture | AAAAAAAAAA (2) AAAAATAAAA (3) AAAATAAAAA AAATAAAAAA (2) AAGAAAAAAA (3) GATCCCAAAT (4)
| 305.7 | 0.3057 |
| 3T3 fibroblasts | AAAAAAAAAA (2)
| 28 | 0.028 |
| E15 cortex | AAAAAAAAAA (2) AAGAAAAAAA (3)
| 237.5 | 0.2375 |
| P1 cortex | AAAAAAAAAA (2) AAAAATAAAA (3) AAAATAAAAA AAATAAAAAA (2) AAGAAAAAAA (3)
| 272.6 | 0.2726 |
| Hypothalamus | AAAAAAAAAA (2) AAAAATAAAA (3) AAAATAAAAA AAATAAAAAA (2) AAGAAAAAAA (3)
| 150.3 | 0.1503 |
| E12.5 retina | AAAAAAAAAA (2) AAAAATAAAA (3) AAAATAAAAA AAATAAAAAA (2) AAGAAAAAAA (3) GATCCCAAAT (4)
| 157.7 | 0.1577 |
| E14.5 retina | AAAAAAAAAA (2) AAAAATAAAA (3) AAAATAAAAA AAATAAAAAA (2) AAGAAAAAAA (3) GATCCCAAAT (4)
| 136.6 | 0.1366 |
| E16.5 retina | AAAAAAAAAA (2) AAAAATAAAA (3) AAAATAAAAA AAATAAAAAA (2) AAGAAAAAAA (3) GATCCCAAAT (4)
| 68.9 | 0.0689 |
| E18.5 retina | AAAAAAAAAA (2) AAAAATAAAA (3) AAAATAAAAA AAATAAAAAA (2) AAGAAAAAAA (3) GATCCCAAAT (4)
| 418.5 | 0.4185 |
| P0.5 retina | AAAAAAAAAA (2) AAAAATAAAA (3) AAAATAAAAA AAGAAAAAAA (3) GATCCCAAAT (4)
| 133.5 | 0.1335 |
| P2.5 retina | AAAAAAAAAA (2) AAAAATAAAA (3) AAAATAAAAA AAATAAAAAA (2) AAGAAAAAAA (3) GATCCCAAAT (4) GTTTAAAATA (2)
| 369.7 | 0.3697 |
| P4.5 retina | AAAAAAAAAA (2) AAAAATAAAA (3) AAAATAAAAA AAATAAAAAA (2) AAGAAAAAAA (3) GATCCCAAAT (4)
| 326.8 | 0.3268 |
| P6.5 retina | AAAAAAAAAA (2) AAAAATAAAA (3) AAAATAAAAA AAATAAAAAA (2) AAGAAAAAAA (3) GATCCCAAAT (4)
| 308.4 | 0.3084 |
| P10.5 crx- retina | AAAAAAAAAA (2) AAAAATAAAA (3) AAAATAAAAA AAATAAAAAA (2) AAGAAAAAAA (3) GATCCCAAAT (4) GTTTAAAATA (2)
| 65.1 | 0.0651 |
| P10.5 crx+ retina | AAAAAAAAAA (2) AAAAATAAAA (3) AAAATAAAAA AAATAAAAAA (2) AAGAAAAAAA (3) GATCCCAAAT (4)
| 111.4 | 0.1114 |
| Adult retinal | AAAAAAAAAA (2) AAAAATAAAA (3) AAAATAAAAA AAATAAAAAA (2) AAGAAAAAAA (3) GATCCCAAAT (4)
| 66.9 | 0.0669 |
| ONL | AAAAAAAAAA (2) AAAATAAAAA AAATAAAAAA (2) AAGAAAAAAA (3) GATCCCAAAT (4) GTTTAAAATA (2)
| 128.2 | 0.1282 |