Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.222584	Pygb	brain glycogen phosphorylase	2	2 84.0 cM	110078
Gene Ontology	carbohydrate metabolism | catalytic activity | glycogen metabolism | phosphorylase activity | transferase activity | transferase activity, transferring glycosyl groups
Human Homolog	PYGB[phosphorylase, glycogen; brain]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 105 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ACCACCCTTC CCCACCCCCA CTGCTGTACC GGTGAACTGG GTGGGGAAAA (2) TAAGACTATT TTTTCCACTT (2) 29.4 0.0294 Cb medulloblastoma ACCACCCTTC CTGCTGTACC GGTGAACTGG GTGGGGAAAA (2) TTTTCCACTT (2) 32.3 0.0323 P8 GC+1d culture ACCACCCTTC CCCACCCCCA CTGCTGTACC GGTGAACTGG TAAGACTATT TTTTCCACTT (2) 44.4 0.0444 P8 GC+SHH+1d culture ACCACCCTTC CCCACCCCCA CTGCTGTACC GTGGGGAAAG (2) TTTTCCACTT (2) 37.5 0.0375 3T3 fibroblasts GGTGAACTGG 3.5 0.0035 E15 cortex GGTGAACTGG TTTTCCACTT (2) 19.7 0.0197 P1 cortex ACCACCCTTC CTGCTGTACC GGTGAACTGG TTTTCCACTT (2) 22.6 0.0226 Hypothalamus ACCACCCTTC CCCACCCCCA CTGCTGTACC GGTGAACTGG TAAGACTATT TTTTCCACTT (2) 19.8 0.0198 E12.5 retina ACCACCCTTC CCTCTAGCCA CTGCTGTACC GGTGAACTGG GTGGGGAAAG (2) TTTTCCACTT (2) 45.2 0.0452 E14.5 retina ACCACCCTTC CTGCTGTACC GGTGAACTGG GTGGGGAAAA (2) TAAGACTATT TTTTCCACTT (2) 45.5 0.0455 E16.5 retina ACCACCCTTC CCCACCCCCA CCTCTAGCCA CTGCTGTACC TAAGACTATT TTTTCCACTT (2) 76 0.076 E18.5 retina ACCACCCTTC CCCACCCCCA CTGCTGTACC GGTGAACTGG TTTTCCACTT (2) 38.2 0.0382 P0.5 retina ACCACCCTTC CTGCTGTACC GGTGAACTGG TTTTCCACTT (2) 47.1 0.0471 P2.5 retina ACCACCCTTC CCCACCCCCA CTGCTGTACC GGTGAACTGG GTGGGGAAAA (2) TTTTCCACTT (2) 63.5 0.0635 P4.5 retina ACCACCCTTC CTGCTGTACC GGTGAACTGG TAAGACTATT TTTTCCACTT (2) 41.6 0.0416 P6.5 retina ACCACCCTTC CCCACCCCCA CCTCTAGCCA CTGCTGTACC GGTGAACTGG GTGGGGAAAA (2) TAAGACTATT TTTTCCACTT (2) 41.8 0.0418 P10.5 crx- retina ACCACCCTTC CTGCTGTACC GGTGAACTGG GTGGGGAAAA (2) TAAGACTATT TTTTCCACTT (2) 65.1 0.0651 P10.5 crx+ retina CCCACCCCCA CTGCTGTACC GGTGAACTGG GTGGGGAAAA (2) TAAGACTATT 30.7 0.0307 Adult retinal ACCACCCTTC CCCACCCCCA CTGCTGTACC GGTGAACTGG GTGGGGAAAA (2) GTGGGGAAAG (2) TTTTCCACTT (2) 29.8 0.0298 ONL CTGCTGTACC GGTGAACTGG GTGGGGAAAG (2) TAAGACTATT TTTTCCACTT (2) 21 0.021