| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | CCCGCCTCTG CGGGCTCCAC (2) TGCCACAGCT (2) TTTAAAATGT (2) TTTCAATTCT
| 11.4 | 0.0114 |
| Cb medulloblastoma | AATCAAAAAA
| 2.3 | 0.0023 |
| P8 GC+1d culture | CGGGCTCCAC (2) GCCGGCCTCT TTTAAAATGT (2) TTTCAATTCT
| 7.9 | 0.0079 |
| P8 GC+SHH+1d culture | AATCAAAAAA CGGGCTCCAC (2) TTTAAAATGT (2)
| 9.4 | 0.0094 |
| 3T3 fibroblasts | CCCGCCTCTG TGCCACAGCT (2)
| 10.5 | 0.0105 |
| E15 cortex | CGGGCTCCAC (2)
| 9.9 | 0.0099 |
| P1 cortex | CGGGCTCCAC (2) TGCCACAGCT (2) TTTAAAATGT (2)
| 13.5 | 0.0135 |
| Hypothalamus | AATCAAAAAA CGGGCTCCAC (2)
| 5.4 | 0.0054 |
| E12.5 retina | CGGGCTCCAC (2)
| 1.9 | 0.0019 |
| E14.5 retina | GCCGGCCTCT TTTAAAATGT (2)
| 5.4 | 0.0054 |
| E16.5 retina | CGGGCTCCAC (2) TACCCCAATC (2) TTTAAAATGT (2)
| 5.4 | 0.0054 |
| E18.5 retina | CGGGCTCCAC (2) TACCCCAATC (2) TGCCACAGCT (2)
| 5.4 | 0.0054 |
| P0.5 retina | CGGGCTCCAC (2) TGCCACAGCT (2)
| 4 | 0.004 |
| P2.5 retina | TGCCACAGCT (2) TTTAAAATGT (2) TTTCAATTCT
| 5.4 | 0.0054 |
| P4.5 retina | CCCGCCTCTG CGGGCTCCAC (2) GCCGGCCTCT TTTAAAATGT (2) TTTCAATTCT
| 13.9 | 0.0139 |
| P6.5 retina | AATCAAAAAA CGGGCTCCAC (2)
| 6.7 | 0.0067 |
| P10.5 crx- retina | CGGGCTCCAC (2) GCCGGCCTCT TTTAAAATGT (2)
| 13.1 | 0.0131 |
| P10.5 crx+ retina | CGGGCTCCAC (2) TGCCACAGCT (2) TTTAAAATGT (2)
| 13.4 | 0.0134 |
| Adult retinal | CCCGCCTCTG TACCCCAATC (2) TGCCACAGCT (2) TTTAAAATGT (2)
| 16.8 | 0.0168 |
| ONL | CCCGCCTCTG
| 1.9 | 0.0019 |