Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.223717	Smad1	MAD homolog 1 (Drosophila)	8	8 C1	17125
Gene Ontology	BMP signaling pathway | BMP signaling pathway | common-partner SMAD protein phosphorylation | gametogenesis | homeostasis | intracellular | MAPKKK cascade | organogenesis | protein binding | regulation of transcription from Pol II promoter | regulation of transcription, DNA-dependent | RNA polymerase II transcription factor activity | SMAD protein heteromerization | transcription factor activity | transcription factor complex
Human Homolog	SMAD1[SMAD, mothers against DPP homolog 1 (Drosophila)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 10 In Situ Hybridization Images

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SAGE Tags

Total 48 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AGACCCTGCT TACTTGAAGG TCATTTATTG (2) TTGTCACCAT 23 0.023 Cb medulloblastoma AGACCCTGCT GAAGAGCTGG (4) 4.6 0.0046 P8 GC+1d culture AGACCCTGCT TTGTCACCAT 13.7 0.0137 P8 GC+SHH+1d culture AGACCCTGCT ATGGCGCCTC TACTTGAAGG TCATTTATTG (2) 25.8 0.0258 3T3 fibroblasts AGACCCTGCT ATGGCGCCTC TACTTGAAGG TCATTTATTG (2) 24.5 0.0245 E15 cortex AGACCCTGCT 34.6 0.0346 P1 cortex AGACCCTGCT CATAGTAATC 9 0.009 Hypothalamus AGACCCTGCT TTGTCACCAT 10.8 0.0108 E12.5 retina AGACCCTGCT ATGGCGCCTC CATAGTAATC 11.3 0.0113 E14.5 retina AGACCCTGCT TCATTTATTG (2) TTGTCACCAT 20 0.02 E16.5 retina AGACCCTGCT GAAGAGCTGG (4) TTGTCACCAT 28.9 0.0289 E18.5 retina AGACCCTGCT TGTCCCACCG 20 0.02 P0.5 retina AGACCCTGCT ATGGCGCCTC CATAGTAATC TCATTTATTG (2) 9.9 0.0099 P2.5 retina AGACCCTGCT TCATTTATTG (2) 12.4 0.0124 P4.5 retina AGACCCTGCT CATAGTAATC TCATTTATTG (2) 23.8 0.0238 P6.5 retina AGACCCTGCT 8.3 0.0083 P10.5 crx- retina AGACCCTGCT 9.3 0.0093 P10.5 crx+ retina AGACCCTGCT ATGGCGCCTC 21.1 0.0211 Adult retinal AGACCCTGCT 14.8 0.0148 ONL AGACCCTGCT TGTCCCACCG 7.6 0.0076