Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.22413	Arhgap1	Rho GTPase activating protein 1	2		228359
Gene Ontology	cellular_component unknown | Rho GTPase activator activity | small GTPase mediated signal transduction
Human Homolog	ARHGAP1[Rho GTPase activating protein 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 66 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AACAAACAAA (3) ATTGGTGCCA GTAAATATTT (2) TATTTTACCG 11.3 0.0113 Cb medulloblastoma AACAAACAAA (3) ATTGGTGCCA GGTCCTGTTC 6.9 0.0069 P8 GC+1d culture AACAAACAAA (3) CAGCCAAGCT GCCTACTTAA (2) GGTCCTGTTC GTGTAGGGCT TATTTTACCG 26.2 0.0262 P8 GC+SHH+1d culture AACAAACAAA (3) GCCTACTTAA (2) GGTCCTGTTC TATTTTACCG 21.2 0.0212 3T3 fibroblasts CAGCCAAGCT GCCTACTTAA (2) 14 0.014 P1 cortex AACAAACAAA (3) GCCTACTTAA (2) 9 0.009 Hypothalamus AACAAACAAA (3) GCCTACTTAA (2) GTAAATATTT (2) TATTTTACCG 12.6 0.0126 E12.5 retina AACAAACAAA (3) ATTGGTGCCA TATTTTACCG 5.7 0.0057 E14.5 retina CCAAAATAAA (2) GGGGGGGGTC TATTTTACCG 12.7 0.0127 E16.5 retina AACAAACAAA (3) ATTGGTGCCA CCAAAATAAA (2) GGGGGGGGTC GTGTAGGGCT TATTTTACCG 16.2 0.0162 E18.5 retina AACAAACAAA (3) TATTTTACCG 10.9 0.0109 P0.5 retina AACAAACAAA (3) GCCTACTTAA (2) TATTTTACCG 11.8 0.0118 P2.5 retina AACAAACAAA (3) ATTGGTGCCA CCAAAATAAA (2) GCCTACTTAA (2) GGGGGGGGTC TATTTTACCG 24.8 0.0248 P4.5 retina AACAAACAAA (3) CCAAAATAAA (2) GTAAATATTT (2) TATTTTACCG 27.7 0.0277 P6.5 retina AACAAACAAA (3) ATTGGTGCCA CCAAAATAAA (2) GTAAATATTT (2) TATTTTACCG 28.4 0.0284 P10.5 crx- retina AACAAACAAA (3) GCCTACTTAA (2) TATTTTACCG 13 0.013 P10.5 crx+ retina AACAAACAAA (3) CCAAAATAAA (2) TATTTTACCG 11.5 0.0115 Adult retinal TATTTTACCG 3.7 0.0037 ONL AACAAACAAA (3) GCCTACTTAA (2) 5.7 0.0057