| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | CAGGTGAGCG GCCAAAAAAA (4) TGCTGCTGAC
| 58.7 | 0.0587 |
| Cb medulloblastoma | CAGGTGAGCG GCCAAAAAAA (4)
| 18.4 | 0.0184 |
| P8 GC+1d culture | CAGATGCTGG CAGGTGAGCG GCCAAAAAAA (4)
| 52.5 | 0.0525 |
| P8 GC+SHH+1d culture | CAGGTGAGCG GAAAAACCAG GCCAAAAAAA (4)
| 55 | 0.055 |
| 3T3 fibroblasts | CAGGTGAGCG
| 42.1 | 0.0421 |
| E15 cortex | CAGGTGAGCG GCCAAAAAAA (4)
| 29.6 | 0.0296 |
| P1 cortex | CAGGTGAGCG GCCAAAAAAA (4)
| 13.6 | 0.0136 |
| Hypothalamus | CAGGTGAGCG GCCAAAAAAA (4) TGCTGCTGAC
| 21.8 | 0.0218 |
| E12.5 retina | CAGGTGAGCG GGATCCTGGG
| 37.6 | 0.0376 |
| E14.5 retina | CAGGTGAGCG GATTTCTGTG GCCAAAAAAA (4)
| 29.1 | 0.0291 |
| E16.5 retina | CAGGTGAGCG GATTTCTGTG GCCAAAAAAA (4)
| 34.4 | 0.0344 |
| E18.5 retina | CAGGTGAGCG GCCAAAAAAA (4)
| 38.2 | 0.0382 |
| P0.5 retina | CAGATGCTGG CAGGTGAGCG GCCAAAAAAA (4)
| 55 | 0.055 |
| P2.5 retina | CAGGTGAGCG GAAAAACCAG GCCAAAAAAA (4)
| 24.7 | 0.0247 |
| P4.5 retina | CAGGTGAGCG GCCAAAAAAA (4)
| 25.8 | 0.0258 |
| P6.5 retina | CAGGTGAGCG GCCAAAAAAA (4)
| 21.7 | 0.0217 |
| P10.5 crx- retina | CAGGTGAGCG GCCAAAAAAA (4)
| 52 | 0.052 |
| P10.5 crx+ retina | CAGGTGAGCG GAAAAACCAG GATTTCTGTG GCCAAAAAAA (4)
| 40.3 | 0.0403 |
| Adult retinal | CAGGTGAGCG GCCAAAAAAA (4) TGCTGCTGAC
| 20.4 | 0.0204 |
| ONL | CAGGTGAGCG GCCAAAAAAA (4) GGATCCTGGG
| 15.3 | 0.0153 |