| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | CCTGAAGATG (3) GGGCAGATCT (2) TACCTATTGT (2)
| 4.8 | 0.0048 |
| Cb medulloblastoma | TACCTATTGT (2)
| 4.6 | 0.0046 |
| P8 GC+1d culture | CCAGGAGGGT (2) CCTGAAGATG (3) TACCTATTGT (2)
| 14.8 | 0.0148 |
| P8 GC+SHH+1d culture | AAAATTCATT (2) ACACACTGGA (2) CCTGAAGATG (3) GGGCAGATCT (2) TACCTATTGT (2) TTAAAGTTTT (2)
| 11.7 | 0.0117 |
| 3T3 fibroblasts | CCTGAAGATG (3)
| 3.5 | 0.0035 |
| E15 cortex | AAAATTCATT (2) ACACACTGGA (2) TTAAAGTTTT (2)
| 14.7 | 0.0147 |
| P1 cortex | CCTGAAGATG (3) TACCTATTGT (2) TTAAAGTTTT (2)
| 27.2 | 0.0272 |
| Hypothalamus | AAAATTCATT (2) CCTGAAGATG (3) TACCTATTGT (2)
| 7.2 | 0.0072 |
| E12.5 retina | CCTGAAGATG (3)
| 1.9 | 0.0019 |
| E14.5 retina | CCAGGAGGGT (2) CCTGAAGATG (3)
| 3.6 | 0.0036 |
| E16.5 retina | ACACACTGGA (2)
| 1.8 | 0.0018 |
| E18.5 retina | TACCTATTGT (2)
| 3.6 | 0.0036 |
| P0.5 retina | CCTGAAGATG (3) TACCTATTGT (2)
| 4 | 0.004 |
| P2.5 retina | GGGCAGATCT (2) TACCTATTGT (2) TTAAAGTTTT (2)
| 10.5 | 0.0105 |
| P4.5 retina | TACCTATTGT (2) TTAAAGTTTT (2)
| 6 | 0.006 |
| P6.5 retina | CCTGAAGATG (3) GGGCAGATCT (2) TACCTATTGT (2)
| 10.1 | 0.0101 |
| P10.5 crx- retina | ACACACTGGA (2) CCTGAAGATG (3) TACCTATTGT (2)
| 13.1 | 0.0131 |
| P10.5 crx+ retina | GGGCAGATCT (2) TACCTATTGT (2)
| 11.5 | 0.0115 |
| Adult retinal | CCAGGAGGGT (2) CCTGAAGATG (3) TACCTATTGT (2)
| 14.9 | 0.0149 |
| ONL | CCTGAAGATG (3) TACCTATTGT (2)
| 9.5 | 0.0095 |