Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.22574	Csf1r	colony stimulating factor 1 receptor	18	18 30.0 cM	12978
Gene Ontology	ATP binding | cell growth and/or maintenance | extracellular space | integral to membrane | intracellular | kinase activity | membrane | protein amino acid phosphorylation | protein binding | protein kinase activity | protein serine/threonine kinase activity | protein-tyrosine kinase activity | receptor activity | regulation of cell cycle | transferase activity | transmembrane receptor protein tyrosine kinase activity | transmembrane receptor protein tyrosine kinase signaling pathway
Human Homolog	CSF1R[colony stimulating factor 1 receptor, formerly McDonough feline sarcoma viral (v-fms) oncogene homolog]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 86 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GGCTCAGGTG (2) TGAAACACTG (2) TGGCCAAGAT 29.4 0.0294 Cb medulloblastoma ATGCTGTATA (2) CTGGTGTTTG (2) GGCTCAGGTG (2) TGAAACACTG (2) TTTCAAATAA 16.1 0.0161 P8 GC+1d culture ATGCTGTATA (2) GCAGGCACTA GGCTCAGGTG (2) GTCAGGGGGC (2) TGAAACACTG (2) TTTCAAATAA 27.3 0.0273 P8 GC+SHH+1d culture AGGGGTCTGG ATGCTGTATA (2) CAGCCAGTAC CTGCTGTCTG CTGGTGTTTG (2) GCAGGCACTA GGCTCAGGTG (2) GTCAGGGGGA (2) GTCAGGGGGC (2) TGAAACACTG (2) TTTCAAATAA 41.2 0.0412 3T3 fibroblasts TGAAACACTG (2) 3.5 0.0035 E15 cortex GCAGGCACTA GTCAGGGGGC (2) TGAAACACTG (2) 19.7 0.0197 P1 cortex AGGGGTCTGG CCCTGAGCCA 9 0.009 Hypothalamus AGGGGTCTGG GCAGGCACTA GGCTCAGGTG (2) GTCAGGGGGA (2) TGAAACACTG (2) TTTCAAATAA 12.6 0.0126 E12.5 retina GGCTCAGGTG (2) GTCAGGGGGC (2) TGAAACACTG (2) TTTCAAATAA 15.1 0.0151 E14.5 retina ATGCTGTATA (2) GTCAGGGGGC (2) TGAAACACTG (2) TTTCAAATAA 23.6 0.0236 E16.5 retina CTGCTGTCTG GTCAGGGGGC (2) TGAAACACTG (2) TTTCAAATAA 19.9 0.0199 E18.5 retina CAGCCAGTAC TATGTAAAGA TGAAACACTG (2) TTTCAAATAA 27.2 0.0272 P0.5 retina CCCTGAGCCA GGCTCAGGTG (2) GTCAGGGGGC (2) TATGTAAAGA TGAAACACTG (2) TTTCAAATAA 17.9 0.0179 P2.5 retina GGCTCAGGTG (2) GTCAGGGGGC (2) TGAAACACTG (2) TTTCAAATAA 30 0.03 P4.5 retina GTCAGGGGGA (2) GTCAGGGGGC (2) TGAAACACTG (2) TGGCCAAGAT TTTCAAATAA 41.7 0.0417 P6.5 retina CAGCCAGTAC CTGCTGTCTG GGCTCAGGTG (2) GTCAGGGGGA (2) GTCAGGGGGC (2) TGAAACACTG (2) TTTCAAATAA 38.3 0.0383 P10.5 crx- retina TGAAACACTG (2) TTTCAAATAA 11.1 0.0111 P10.5 crx+ retina ATGCTGTATA (2) GTCAGGGGGC (2) TGAAACACTG (2) TTTCAAATAA 25 0.025 Adult retinal CAGCCAGTAC CTGGTGTTTG (2) TGAAACACTG (2) TTTCAAATAA 18.7 0.0187 ONL TGAAACACTG (2) 3.8 0.0038