| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | TACCCTAAAA TTTTCTGCTG
| 11.5 | 0.0115 |
| Cb medulloblastoma | CACAGCTCTG (20) CATTTCTTAC (5) TTTTCTGCTG
| 18.4 | 0.0184 |
| P8 GC+1d culture | AAGAGGGCAA (3) AATGAATGAT CATTTCTTAC (5) TTTTCTGCTG
| 25.1 | 0.0251 |
| P8 GC+SHH+1d culture | AATGAATGAT TACCCTAAAA TTTTCTGCTG
| 14 | 0.014 |
| 3T3 fibroblasts | TTTTCTGCTG
| 10.5 | 0.0105 |
| E15 cortex | TTTTCTGCTG
| 4.9 | 0.0049 |
| P1 cortex | CACAGCTCTG (20) GGCAGGAGGG (4) TTTTCTGCTG
| 36.4 | 0.0364 |
| Hypothalamus | CATTTCTTAC (5) TTTTCTGCTG
| 5.4 | 0.0054 |
| E12.5 retina | CATTTCTTAC (5) GGCAGGAGGG (4) TTTTCTGCTG
| 18.8 | 0.0188 |
| E14.5 retina | GGCAGGAGGG (4) TTTTCTGCTG
| 7.2 | 0.0072 |
| E16.5 retina | CATTTCTTAC (5) GGCAGGAGGG (4) TTTTCTGCTG
| 10.8 | 0.0108 |
| E18.5 retina | CATTTCTTAC (5) GGCAGGAGGG (4) TTTTCTGCTG
| 18.2 | 0.0182 |
| P0.5 retina | TTTTCTGCTG
| 13.7 | 0.0137 |
| P2.5 retina | CATTTCTTAC (5) GGCAGGAGGG (4) TTTTCTGCTG
| 24.6 | 0.0246 |
| P4.5 retina | GGCAGGAGGG (4) TTTTCTGCTG
| 11.9 | 0.0119 |
| P6.5 retina | CATTTCTTAC (5) GGCAGGAGGG (4) TTTTCTGCTG
| 10.1 | 0.0101 |
| P10.5 crx- retina | AAGAGGGCAA (3) GGCAGGAGGG (4) TACCCTAAAA TTTTCTGCTG
| 11.3 | 0.0113 |
| P10.5 crx+ retina | CATTTCTTAC (5) GGCAGGAGGG (4) TTTTCTGCTG
| 26.9 | 0.0269 |
| Adult retinal | CACAGCTCTG (20) CATTTCTTAC (5) GGCAGGAGGG (4) TTTTCTGCTG
| 13.1 | 0.0131 |
| ONL | AATGAATGAT GGCAGGAGGG (4) TTTTCTGCTG
| 5.7 | 0.0057 |