Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.226534	4933406E20Rik	RIKEN cDNA 4933406E20 gene	9		74443
Gene Ontology	calcium ion binding | endoplasmic reticulum | oxidoreductase activity | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen | protein metabolism
Human Homolog	PH-4[hypoxia-inducible factor prolyl 4-hydroxylase]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 45 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCTTTAATCC (3) GGGGCAGGGG (2) 53.8 0.0538 Cb medulloblastoma CCTTTAATCC (3) CTGCTCCGTT 46.2 0.0462 P8 GC+1d culture CCTTTAATCC (3) 32 0.032 P8 GC+SHH+1d culture CCTTTAATCC (3) CTGCTCCGTT GCGGCAGCGG (2) 34 0.034 3T3 fibroblasts CCTTTAATCC (3) 70.1 0.0701 E15 cortex CCTTTAATCC (3) 54.4 0.0544 P1 cortex CCTTTAATCC (3) 154.5 0.1545 Hypothalamus CCTTTAATCC (3) CTGCTCCGTT 47.1 0.0471 E12.5 retina CAAGTCAGCC CCTTTAATCC (3) CTGCTCCGTT 80.8 0.0808 E14.5 retina CCTTTAATCC (3) CTGCTCCGTT 123.9 0.1239 E16.5 retina CCTTTAATCC (3) CTGCTCCGTT GCGGCAGCGG (2) 72.4 0.0724 E18.5 retina CCTTTAATCC (3) CTGCTCCGTT 29.1 0.0291 P0.5 retina CCTTTAATCC (3) CTGCTCCGTT 76.5 0.0765 P2.5 retina CAAGTCAGCC CCTTTAATCC (3) CTGCTCCGTT 75.7 0.0757 P4.5 retina CAAGTCAGCC CCTTTAATCC (3) CTGCTCCGTT 51.5 0.0515 P6.5 retina CCTTTAATCC (3) CTGCTCCGTT GGGGCAGGGG (2) 88.4 0.0884 P10.5 crx- retina CCTTTAATCC (3) CTGCTCCGTT 81.8 0.0818 P10.5 crx+ retina CAAGTCAGCC CCTTTAATCC (3) CTGCTCCGTT GCGGCAGCGG (2) 57.6 0.0576 Adult retinal CCTTTAATCC (3) CTGCTCCGTT 140.7 0.1407 ONL CCTTTAATCC (3) CTGCTCCGTT GGGGCAGGGG (2) 90 0.09