Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.227	D430040G12Rik	RIKEN cDNA D430040G12 gene	2		320903
Mm.227	Itgav	integrin alpha V	2	2 46.0 cM	16410
Gene Ontology	angiogenesis | blood vessel development | cell adhesion | cell-matrix adhesion | integral to membrane | integrin complex | integrin-mediated signaling pathway | protein binding | receptor activity
Human Homolog	ITGAV[integrin, alpha V (vitronectin receptor, alpha polypeptide, antigen CD51)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 50 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAACCCTGTC (2) GTACCTGCTT (2) TTCTGCTTTG (2) 16.4 0.0164 Cb medulloblastoma GATTTTCTTT (2) GTACCTGCTT (2) TTCTGCTTTG (2) TTTTAAAAGT (2) 16.1 0.0161 P8 GC+1d culture AAACCCTGTC (2) GACTTCCTGT (3) GTACCTGCTT (2) TTCTGCTTTG (2) 14.8 0.0148 P8 GC+SHH+1d culture AAACCCTGTC (2) GTACCTGCTT (2) TTCTGCTTTG (2) 12.9 0.0129 3T3 fibroblasts GTACCTGCTT (2) TTCTGCTTTG (2) 7 0.007 P1 cortex AAACCCTGTC (2) TTCTGCTTTG (2) TTTTAAAAGT (2) 13.5 0.0135 E14.5 retina AAACCCTGTC (2) GTACCTGCTT (2) TTCTGCTTTG (2) 9 0.009 E16.5 retina AAACCCTGTC (2) GTACCTGCTT (2) TTCTGCTTTG (2) 5.4 0.0054 E18.5 retina AAACCCTGTC (2) TTCTGCTTTG (2) TTTTAAAAGT (2) 5.4 0.0054 P0.5 retina AAACCCTGTC (2) GATTTTCTTT (2) GTACCTGCTT (2) TTCTGCTTTG (2) 9.9 0.0099 P2.5 retina AAACCCTGTC (2) GTACCTGCTT (2) TTCTGCTTTG (2) 8.9 0.0089 P4.5 retina GTACCTGCTT (2) TTCTGCTTTG (2) TTTTAAAAGT (2) 8 0.008 P6.5 retina TTCTGCTTTG (2) TTTTAAAAGT (2) 6.6 0.0066 P10.5 crx- retina AAACCCTGTC (2) GTACCTGCTT (2) 5.6 0.0056 P10.5 crx+ retina AAACCCTGTC (2) GACTTCCTGT (3) GTACCTGCTT (2) TTCTGCTTTG (2) TTTTAAAAGT (2) 13.3 0.0133 Adult retinal AAACCCTGTC (2) GTACCTGCTT (2) 5.6 0.0056 ONL GACTTCCTGT (3) 1.9 0.0019