Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.227456
4930546H06Rik
RIKEN cDNA 4930546H06 gene
17
75202
Mm.227456
9530079D04Rik
RIKEN cDNA 9530079D04 gene
17
320061
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 35 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CCTCTTCCCC (
2
)
TGTGTTCCCA
4.9
0.0049
Cb medulloblastoma
CCTCTTCCCC (
2
)
TGTGTTCCCA
9.2
0.0092
P8 GC+1d culture
CCTCTTCCCC (
2
)
TGTGTTCCCA
12.5
0.0125
P8 GC+SHH+1d culture
CCTCTTCCCC (
2
)
TGTGTTCCCA
7.1
0.0071
3T3 fibroblasts
TGTGTTCCCA
7
0.007
P1 cortex
AGTCCTGATT
(
2
)
TGTGTTCCCA
13.6
0.0136
Hypothalamus
TGTGTTCCCA
1.8
0.0018
E14.5 retina
TGTGTTCCCA
TTTTATAGTT
(
2
)
5.4
0.0054
E16.5 retina
CCTCTTCCCC (
2
)
TGTGTTCCCA
TTTTATAGTT
(
2
)
7.2
0.0072
E18.5 retina
CCTCTTCCCC (
2
)
1.8
0.0018
P2.5 retina
AGTCCTGATT
(
2
)
CCTCTTCCCC (
2
)
8.8
0.0088
P4.5 retina
CCTCTTCCCC (
2
)
7.9
0.0079
P6.5 retina
AACTTCTCAT
(
2
)
AGTCCTGATT
(
2
)
CCTCTTCCCC (
2
)
TGTGTTCCCA
13.3
0.0133
P10.5 crx- retina
CCTCTTCCCC (
2
)
TGTGTTCCCA
11.2
0.0112
P10.5 crx+ retina
AACTTCTCAT
(
2
)
CCTCTTCCCC (
2
)
TGTGTTCCCA
7.6
0.0076
Adult retinal
CCTCTTCCCC (
2
)
TGTGTTCCCA
11.1
0.0111
ONL
AGTCCTGATT
(
2
)
CCTCTTCCCC (
2
)
TGTGTTCCCA
9.5
0.0095
