| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | ATTCCGAATT (2) CAGAATTTGG TGGCTAGAAA TTGGGGTTTC
| 11.4 | 0.0114 |
| Cb medulloblastoma | TGGACTTTGA (4) TTGGGGTTTC
| 4.6 | 0.0046 |
| P8 GC+1d culture | CAGAATTTGG GCCTGGCAGT TGGACTTTGA (4) TGGCTAGAAA
| 5.6 | 0.0056 |
| P8 GC+SHH+1d culture | TGGCTAGAAA TTGGGGTTTC
| 7.1 | 0.0071 |
| 3T3 fibroblasts | GCCTGGCAGT
| 7 | 0.007 |
| E15 cortex | ACTTTTATCC
| 4.9 | 0.0049 |
| P1 cortex | TTGGGGTTTC
| 4.5 | 0.0045 |
| Hypothalamus | GCTGCCCCTC TGGACTTTGA (4) TGGCTAGAAA
| 10.8 | 0.0108 |
| E12.5 retina | CAGAATTTGG TGGCTAGAAA TTGGGGTTTC
| 5.7 | 0.0057 |
| E14.5 retina | GCTGCCCCTC TGGCTAGAAA TTGGGGTTTC
| 7.2 | 0.0072 |
| E16.5 retina | CAGAATTTGG TTGGGGTTTC
| 5.4 | 0.0054 |
| E18.5 retina | GCTGCCCCTC
| 1.8 | 0.0018 |
| P0.5 retina | CAGAATTTGG TGGCTAGAAA
| 4 | 0.004 |
| P2.5 retina | ACTTTTATCC CAGAATTTGG GCTGCCCCTC
| 10.6 | 0.0106 |
| P4.5 retina | ATTCCGAATT (2) CAGAATTTGG GCTGCCCCTC
| 8 | 0.008 |
| P6.5 retina | ATTCCGAATT (2) CAGAATTTGG GCTGCCCCTC TGGACTTTGA (4)
| 10 | 0.01 |
| P10.5 crx- retina | CAGAATTTGG TGGACTTTGA (4)
| 3.8 | 0.0038 |
| P10.5 crx+ retina | CAGAATTTGG GCTGCCCCTC TGGACTTTGA (4) TGGCTAGAAA
| 11.4 | 0.0114 |
| Adult retinal | CAGAATTTGG GCTGCCCCTC
| 13 | 0.013 |
| ONL | ACTTTTATCC ATTCCGAATT (2) CAGAATTTGG
| 11.4 | 0.0114 |