| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | ATGGAGGAGA ATGGTGGACA CTGCCTCACA GATGGCTGTT GGGGTGAAGA TTTTTTTTTC (3)
| 32.5 | 0.0325 |
| Cb medulloblastoma | ATGGTGGACA TTTTTTTTTC (3)
| 11.5 | 0.0115 |
| P8 GC+1d culture | ATGGAAGGAG ATGGAGGGAG (2) ATGGTGGACA CTGCCTCACA GATGGCTGTT
| 22.7 | 0.0227 |
| P8 GC+SHH+1d culture | ATGGAAGGAG ATGGAGGAGA ATGGAGGGAG (2) ATGGTGGACA CTGCCTCACA GAAGCCCAAA GATGGCTGTT TTTTTTTTTC (3)
| 30.5 | 0.0305 |
| 3T3 fibroblasts | ATGGTGGACA CTGCCTCACA
| 35 | 0.035 |
| E15 cortex | ATGGTGGACA CTGCCTCACA GAAGCCCAAA GATGGCTGTT
| 29.5 | 0.0295 |
| P1 cortex | ATGGTGGACA CTGCCTCACA TTTTTTTTTC (3)
| 22.7 | 0.0227 |
| Hypothalamus | ATGGAGGGAG (2) ATGGTGGACA CTCTGAAAAA (2) TTTTTTTTTC (3)
| 19.9 | 0.0199 |
| E12.5 retina | ATGGAAGGAG ATGGAGGGAG (2) ATGGTGGACA CTGCCTCACA TTTTTTTTTC (3)
| 17 | 0.017 |
| E14.5 retina | ATGCTGGAGA (2) ATGGTGGACA GAAGCCCAAA TTTTTTTTTC (3)
| 12.6 | 0.0126 |
| E16.5 retina | ATGGAAGGAG ATGGTGGACA
| 5.4 | 0.0054 |
| E18.5 retina | ATGGAGGGAG (2) CTGCCTCACA GGGGTGAAGA TTTTTTTTTC (3)
| 12.7 | 0.0127 |
| P0.5 retina | ATGGAGGGAG (2) ATGGTGGACA CTGCCTCACA
| 11.8 | 0.0118 |
| P2.5 retina | ATGGTGGACA GATGGCTGTT TTTTTTTTTC (3)
| 7.1 | 0.0071 |
| P4.5 retina | ATGGAGGGAG (2) ATGGTGGACA CTGCCTCACA GGGGTGAAGA TTTTTTTTTC (3)
| 14 | 0.014 |
| P6.5 retina | ATGGTGGACA CTGCCTCACA
| 13.4 | 0.0134 |
| P10.5 crx- retina | ATGCTGGAGA (2) ATGGAGGGAG (2) ATGGTGGACA CTCTGAAAAA (2) CTGCCTCACA
| 16.9 | 0.0169 |
| P10.5 crx+ retina | ATGGAGGAGA ATGGAGGGAG (2) ATGGTGGACA CTGCCTCACA
| 28.8 | 0.0288 |
| Adult retinal | ATGGAGGGAG (2) ATGGTGGACA CTGCCTCACA
| 14.9 | 0.0149 |
| ONL | ATGCTGGAGA (2) ATGGAAGGAG ATGGAGGGAG (2) ATGGTGGACA CTGCCTCACA
| 22.9 | 0.0229 |