Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.230249	A430072O03Rik	RIKEN cDNA A430072O03 gene	1		319286
Mm.230249	C920004C08Rik	RIKEN cDNA C920004C08 gene	1		319365
Mm.230249	Ctse	cathepsin E	1	1 69.1 cM	13034
Gene Ontology	aspartic-type endopeptidase activity | cathepsin E activity | extracellular space | hydrolase activity | neutrophil collagenase activity | pepsin A activity | proteolysis and peptidolysis
Human Homolog	CTSE[cathepsin E]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 61 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GAAGGTCCAG GTTCACGACC (3) TACACAGTAG (5) TGGCTCGGTC (3) TGTGGGCCAG 119 0.119 Cb medulloblastoma GTTCACGACC (3) TGGCTCGGTC (3) TGTGGGCCAG 62.4 0.0624 P8 GC+1d culture CAAGGCACAC (4) GAAGGTCCAG TACACAGTAG (5) TGGCTCGGTC (3) TGTGGGCCAG 237.4 0.2374 P8 GC+SHH+1d culture GAAGGTCCAG TGGCTCGGTC (3) TGTGGGCCAG 126.5 0.1265 3T3 fibroblasts CAAGGCACAC (4) TGGCTCGGTC (3) TGTGGGCCAG 318.9 0.3189 E15 cortex TGGCTCGGTC (3) 217.7 0.2177 P1 cortex TGGCTCGGTC (3) 113.6 0.1136 Hypothalamus CAAGGCACAC (4) TACACAGTAG (5) TGGCTCGGTC (3) TGTGGGCCAG 48.9 0.0489 E12.5 retina TGGCTCGGTC (3) 26.3 0.0263 E14.5 retina TACACAGTAG (5) TGGCTCGGTC (3) 36.4 0.0364 E16.5 retina GTTCACGACC (3) TACACAGTAG (5) TGGCTCGGTC (3) TGTGGGCCAG 47 0.047 E18.5 retina GAAGGTCCAG TGGCTCGGTC (3) TGTGGGCCAG 21.8 0.0218 P0.5 retina GAAGGTCCAG GTTCACGACC (3) TACACAGTAG (5) TGGCTCGGTC (3) TGTGGGCCAG 163 0.163 P2.5 retina TACACAGTAG (5) TGGCTCGGTC (3) TGTGGGCCAG 35.3 0.0353 P4.5 retina TGGCTCGGTC (3) TGTGGGCCAG 33.7 0.0337 P6.5 retina TACACAGTAG (5) TGGCTCGGTC (3) TGTGGGCCAG 60.1 0.0601 P10.5 crx- retina TGGCTCGGTC (3) TGTGGGCCAG 66.9 0.0669 P10.5 crx+ retina CAAGGCACAC (4) GTTCACGACC (3) TACACAGTAG (5) TGGCTCGGTC (3) TGTGGGCCAG 53.8 0.0538 Adult retinal CAAGGCACAC (4) TACACAGTAG (5) TGGCTCGGTC (3) TGTGGGCCAG 59.4 0.0594 ONL GAAGGTCCAG TGGCTCGGTC (3) 7.6 0.0076