Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.233846	Syt4	synaptotagmin 4	18	18 10.0 cM	20983
Gene Ontology	calcium ion binding | integral to membrane | membrane | synapse | synaptic vesicle | transport | transporter activity
Human Homolog	SYT4[synaptotagmin IV]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 75 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AATAAACTGC CAGAGGCCGC GCTACTTAAG TTGAATACAG TTTCTTCAGG 8 0.008 Cb medulloblastoma AATAAACTGC GAACCTGTGG GCTACTTAAG GTAACCTCCC 64.7 0.0647 P8 GC+1d culture CAGAGGCCGC TGGAATACAG TTTCTTCAGG 7.9 0.0079 P8 GC+SHH+1d culture AATAAACTGC CAGAGGCCGC GTAACCTCCC GTCTTGAATT (2) 11.7 0.0117 3T3 fibroblasts CAGAGGCCGC 3.5 0.0035 E15 cortex AATAAACTGC CAGAGGCCGC GAACCTGTGG TGATGGAACA 54.3 0.0543 P1 cortex AATAAACTGC CAGAGGCCGC GAACCTGTGG TTGAATACAG 31.7 0.0317 Hypothalamus AATAAACTGC GAACCTGTGG GCTACTTAAG TGATGGAACA TTTCTTCAGG 32.6 0.0326 E12.5 retina AATAAACTGC CAGAGGCCGC GCTACTTAAG 15.1 0.0151 E14.5 retina AATAAACTGC CAGAGGCCGC GAACCTGTGG GCTACTTAAG TGATGGAACA 25.5 0.0255 E16.5 retina AATAAACTGC CAGAGGCCGC GAACCTGTGG GCTACTTAAG 23.6 0.0236 E18.5 retina AATAAACTGC CAGAGGCCGC GCTACTTAAG TTTCTTCAGG 25.5 0.0255 P0.5 retina AATAAACTGC GAACCTGTGG 9.9 0.0099 P2.5 retina AATAAACTGC CAGAGGCCGC GCTACTTAAG 14.1 0.0141 P4.5 retina AATAAACTGC CAGAGGCCGC GAACCTGTGG GCTACTTAAG TTTCTTCAGG 19.9 0.0199 P6.5 retina AATAAACTGC CAGAGGCCGC GCTACTTAAG TGGAATACAG 18.3 0.0183 P10.5 crx- retina AATAAACTGC CAGAGGCCGC GAACCTGTGG 16.7 0.0167 P10.5 crx+ retina AATAAACTGC CAGAGGCCGC GAACCTGTGG GTAACCTCCC TTGAATACAG TTTCTTCAGG 24.9 0.0249 Adult retinal CAGAGGCCGC GCTACTTAAG 9.3 0.0093 ONL AATAAACTGC CAGAGGCCGC TGGAATACAG TTGAATACAG 7.6 0.0076