| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | TTTTTTTTTT (2)
| 4.9 | 0.0049 |
| Cb medulloblastoma | AGATCAGCTT (2) TTTTTTTTTT (2)
| 4.6 | 0.0046 |
| P8 GC+1d culture | CAGGGAGCTG (3) GAGCCTGAGC (2) GCGAGGACAG (3) TTTTTTTTTT (2)
| 17 | 0.017 |
| P8 GC+SHH+1d culture | AGATCAGCTT (2) CAGGGAGCTG (3) TTTTTTTTTT (2)
| 9.4 | 0.0094 |
| E15 cortex | TTTTTTTTTT (2)
| 4.9 | 0.0049 |
| P1 cortex | GCGAGGACAG (3) TTTTTTTTTT (2)
| 9 | 0.009 |
| Hypothalamus | AGATCAGCTT (2) CAGGGAGCTG (3) GAGCCTGAGC (2) TTTTTTTTTT (2)
| 12.6 | 0.0126 |
| E12.5 retina | GCGAGGACAG (3) TTTTTTTTTT (2)
| 11.3 | 0.0113 |
| E14.5 retina | TTTTTTTTTT (2)
| 23.7 | 0.0237 |
| E16.5 retina | GCGAGGACAG (3) TTTTTTTTTT (2)
| 7.2 | 0.0072 |
| E18.5 retina | CAGGGAGCTG (3) GCGAGGACAG (3) TTTTTTTTTT (2)
| 16.3 | 0.0163 |
| P0.5 retina | GCGAGGACAG (3) TTTTTTTTTT (2)
| 11.8 | 0.0118 |
| P2.5 retina | GAGCCTGAGC (2) GCGAGGACAG (3) TTTTTTTTTT (2)
| 10.6 | 0.0106 |
| P4.5 retina | GCGAGGACAG (3) TTTTTTTTTT (2)
| 13.9 | 0.0139 |
| P6.5 retina | GCGAGGACAG (3) TTTTTTTTTT (2)
| 11.6 | 0.0116 |
| P10.5 crx- retina | GAGCCTGAGC (2) GCGAGGACAG (3)
| 3.8 | 0.0038 |
| P10.5 crx+ retina | AGATCAGCTT (2) CAGGGAGCTG (3) TTTTTTTTTT (2)
| 7.6 | 0.0076 |
| Adult retinal | GAGCCTGAGC (2) TTTTTTTTTT (2)
| 13 | 0.013 |
| ONL | CAGGGAGCTG (3) TTTTTTTTTT (2)
| 5.7 | 0.0057 |