| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AAAAAAAAAA (2) AGCTGTGCTG (2) AGCTGTGGGG (2)
| 210.4 | 0.2104 |
| Cb medulloblastoma | AAAAAAAAAA (2) AGCTGTGCTG (2)
| 814 | 0.814 |
| P8 GC+1d culture | AAAAAAAAAA (2) AGCTGTGCTG (2) AGCTGTTGGG (2)
| 210 | 0.21 |
| P8 GC+SHH+1d culture | AAAAAAAAAA (2) AGCTGTGCTG (2) AGCTGTGGGG (2) AGCTGTTGGG (2) GAGAAAATAT
| 288.2 | 0.2882 |
| 3T3 fibroblasts | AAAAAAAAAA (2) AGCTGTGCTG (2)
| 31.5 | 0.0315 |
| E15 cortex | AAAAAAAAAA (2) AGCTGTGCTG (2) AGCTGTGGGG (2)
| 227.6 | 0.2276 |
| P1 cortex | AAAAAAAAAA (2) AGCTGTGCTG (2) AGCTGTGGGG (2)
| 263.5 | 0.2635 |
| Hypothalamus | AAAAAAAAAA (2) AGCTGTGCTG (2) GTACAGCGTG
| 139.5 | 0.1395 |
| E12.5 retina | AAAAAAAAAA (2) AGCTGTGCTG (2) AGCTGTGGGG (2) GTACAGCGTG
| 150.2 | 0.1502 |
| E14.5 retina | AAAAAAAAAA (2) AGCTGTGGGG (2)
| 96.5 | 0.0965 |
| E16.5 retina | AAAAAAAAAA (2) AGCTGTGCTG (2)
| 47.1 | 0.0471 |
| E18.5 retina | AAAAAAAAAA (2) AGCTGTGCTG (2) TGGGTACAGA
| 378.3 | 0.3783 |
| P0.5 retina | AAAAAAAAAA (2) AGCTGTGCTG (2) AGCTGTGGGG (2) AGCTGTTGGG (2)
| 125.7 | 0.1257 |
| P2.5 retina | AAAAAAAAAA (2) AGCTGTGCTG (2) AGCTGTGGGG (2)
| 336.2 | 0.3362 |
| P4.5 retina | AAAAAAAAAA (2) AGCTGTGCTG (2) AGCTGTTGGG (2)
| 287.3 | 0.2873 |
| P6.5 retina | AAAAAAAAAA (2) AGCTGTGCTG (2) GTACAGCGTG
| 270.2 | 0.2702 |
| P10.5 crx- retina | AAAAAAAAAA (2) AGCTGTGCTG (2) AGCTGTGGGG (2) AGCTGTTGGG (2)
| 55.8 | 0.0558 |
| P10.5 crx+ retina | AAAAAAAAAA (2) AGCTGTGCTG (2) GAGAAAATAT TGGGTACAGA
| 111.4 | 0.1114 |
| Adult retinal | AAAAAAAAAA (2) AGCTGTGCTG (2) AGCTGTGGGG (2) GTACAGCGTG
| 64.9 | 0.0649 |
| ONL | AAAAAAAAAA (2) AGCTGTGGGG (2) AGCTGTTGGG (2)
| 107.2 | 0.1072 |