| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | ATACCGTGTT CACAGGAGTC CTGGCTGACT (2) GCAAAAAAAA (2) GGAGTAGGAT
| 22.8 | 0.0228 |
| Cb medulloblastoma | GCAAAAAAAA (2) TGTTCTGATA (2) TTCTTCTGGT (2)
| 64.7 | 0.0647 |
| P8 GC+1d culture | GCAAAAAAAA (2) TTCTTCTGGT (2)
| 13.7 | 0.0137 |
| P8 GC+SHH+1d culture | GCAAAAAAAA (2)
| 29.3 | 0.0293 |
| 3T3 fibroblasts | CACAGGAGTC GCAAAAAAAA (2)
| 7 | 0.007 |
| E15 cortex | GCAAAAAAAA (2) GCAACTTCTT
| 14.8 | 0.0148 |
| P1 cortex | GCAAAAAAAA (2)
| 4.5 | 0.0045 |
| Hypothalamus | CACAGGAGTC GCAAAAAAAA (2) TGTTCTGATA (2) TTCTTCTGGT (2)
| 30.7 | 0.0307 |
| E12.5 retina | GCAAAAAAAA (2) TTCTTCTGGT (2)
| 13.2 | 0.0132 |
| E14.5 retina | ATACCGTGTT GCAAAAAAAA (2) GCAACTTCTT
| 18.2 | 0.0182 |
| E16.5 retina | ATACCGTGTT GCAAAAAAAA (2) TGTTCTGATA (2)
| 16.3 | 0.0163 |
| E18.5 retina | CACAGGAGTC GCAAAAAAAA (2) GCAACTTCTT GGAGTAGGAT
| 34.6 | 0.0346 |
| P0.5 retina | GCAAAAAAAA (2)
| 17.7 | 0.0177 |
| P2.5 retina | CTGGCTGACT (2) GCAAAAAAAA (2) TTCTTCTGGT (2)
| 26.5 | 0.0265 |
| P4.5 retina | ATACCGTGTT GCAAAAAAAA (2) TTCTTCTGGT (2)
| 29.8 | 0.0298 |
| P6.5 retina | CACAGGAGTC GCAAAAAAAA (2) TTCTTCTGGT (2)
| 18.4 | 0.0184 |
| P10.5 crx- retina | ATACCGTGTT GCAAAAAAAA (2) TTCTTCTGGT (2)
| 9.4 | 0.0094 |
| P10.5 crx+ retina | CTGGCTGACT (2) GCAAAAAAAA (2) GCAACTTCTT GGAGTAGGAT
| 7.6 | 0.0076 |
| Adult retinal | ATACCGTGTT CACAGGAGTC GCAAAAAAAA (2) TGTTCTGATA (2) TTCTTCTGGT (2)
| 20.5 | 0.0205 |
| ONL | CTGGCTGACT (2) GCAAAAAAAA (2)
| 3.8 | 0.0038 |