| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | GAAGTGGAAG (4) GGCAAATGGA (2)
| 3.2 | 0.0032 |
| P8 GC+1d culture | TCCGGGCAGC
| 1.1 | 0.0011 |
| P8 GC+SHH+1d culture | GAAGTGGAAG (4) GGCAAATGGA (2)
| 2.4 | 0.0024 |
| 3T3 fibroblasts | GAAGTGGAAG (4)
| 21 | 0.021 |
| E15 cortex | AAATGTAAAG (3)
| 4.9 | 0.0049 |
| P1 cortex | CTGGCCAGTC
| 9.1 | 0.0091 |
| Hypothalamus | GAAGTGGAAG (4)
| 1.8 | 0.0018 |
| E12.5 retina | AAATGTAAAG (3) GAAGTGGAAG (4)
| 9.4 | 0.0094 |
| E14.5 retina | GGCAAATGGA (2)
| 1.8 | 0.0018 |
| E16.5 retina | TCCGGGCAGC
| 1.8 | 0.0018 |
| E18.5 retina | AAATGTAAAG (3) GAAGTGGAAG (4)
| 5.4 | 0.0054 |
| P0.5 retina | GAAGTGGAAG (4) GGCAAATGGA (2) TCCGGGCAGC
| 11.8 | 0.0118 |
| P2.5 retina | GAAGTGGAAG (4) GGCAAATGGA (2) TCCGGGCAGC
| 5.4 | 0.0054 |
| P6.5 retina | AAATGTAAAG (3) GAAGTGGAAG (4) GGCAAATGGA (2)
| 15.1 | 0.0151 |
| P10.5 crx- retina | GAAGTGGAAG (4)
| 14.9 | 0.0149 |
| P10.5 crx+ retina | AAATGTAAAG (3) CTGGCCAGTC GAAGTGGAAG (4)
| 13.4 | 0.0134 |
| Adult retinal | AAATGTAAAG (3) GAAGTGGAAG (4)
| 38.9 | 0.0389 |
| ONL | AAATGTAAAG (3) GAAGTGGAAG (4) GGCAAATGGA (2)
| 47.9 | 0.0479 |