| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AAAGGGCACT (2) AGCCCCTGGA (3)
| 8.1 | 0.0081 |
| Cb medulloblastoma | AAAGGGCACT (2) GCACAGACAT
| 4.6 | 0.0046 |
| P8 GC+1d culture | GAAAGGCCAG (2) GCACAGACAT
| 3.4 | 0.0034 |
| P8 GC+SHH+1d culture | AAAGGGCACT (2) AGCCCCTGGA (3) GCACAGACAT
| 11.8 | 0.0118 |
| 3T3 fibroblasts | GAAAGGCCAG (2) GCACAGACAT
| 7 | 0.007 |
| Hypothalamus | AAAGGGCACT (2) GCACAGACAT
| 7.2 | 0.0072 |
| E12.5 retina | AAAGGGCACT (2) GAAAGGCCAG (2) GCACAGACAT
| 13.1 | 0.0131 |
| E14.5 retina | AAAGGGCACT (2) GCACAGACAT
| 14.6 | 0.0146 |
| E16.5 retina | AAAGGGCACT (2) GAAAGGCCAG (2) GCACAGACAT
| 12.6 | 0.0126 |
| E18.5 retina | AAAGGGCACT (2) GCACAGACAT
| 9.1 | 0.0091 |
| P0.5 retina | GAAAGGCCAG (2)
| 2 | 0.002 |
| P2.5 retina | AAAGGGCACT (2) GAAAGGCCAG (2) GCACAGACAT
| 12.3 | 0.0123 |
| P4.5 retina | AAAGGGCACT (2) GAAAGGCCAG (2) GCACAGACAT
| 11.9 | 0.0119 |
| P6.5 retina | AAAGGGCACT (2)
| 6.7 | 0.0067 |
| P10.5 crx- retina | AAAGGGCACT (2) GAAAGGCCAG (2)
| 7.5 | 0.0075 |
| P10.5 crx+ retina | AAAGGGCACT (2) AGCCCCTGGA (3) GAAAGGCCAG (2) GCACAGACAT
| 11.4 | 0.0114 |
| ONL | AAAGGGCACT (2) GCACAGACAT
| 9.5 | 0.0095 |