| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AATCCTGTGA (2) CAGAAAAAAA (2) CAGAAGAAGA CAGGCAAAAC (2) TACGTTTGGT TGGTTGCTGG
| 114.1 | 0.1141 |
| Cb medulloblastoma | CAGAAAAAAA (2) CAGGCAAAAC (2) TACGTTTGGT TGGTTGCTGG
| 131.7 | 0.1317 |
| P8 GC+1d culture | AATCCTGTGA (2) CAGAAAAAAA (2) CAGGCAAAAC (2) TACGTTTGGT TGGTTGCTGG
| 82.1 | 0.0821 |
| P8 GC+SHH+1d culture | ACTGTGTATG CAGAAGAAGA CAGGCAAAAC (2) TACGTTTGGT TGGTTGCTGG
| 128.8 | 0.1288 |
| 3T3 fibroblasts | CAGGCAAAAC (2) TACGTTTGGT TGGTTGCTGG
| 238.3 | 0.2383 |
| E15 cortex | CAGGCAAAAC (2) GAGAAGGAAG TACGTTTGGT TGGTTGCTGG
| 291.8 | 0.2918 |
| P1 cortex | CAGGCAAAAC (2) TACGTTTGGT TGGTTGCTGG
| 100 | 0.1 |
| Hypothalamus | ACTGTGTATG CAGGCAAAAC (2) TACGTTTGGT TGGTTGCTGG
| 365.9 | 0.3659 |
| E12.5 retina | AATCCTGTGA (2) ACTGTGTATG CAGAAAAAAA (2) CAGGCAAAAC (2) GAGAAGGAAG TACGTTTGGT TGGTTGCTGG
| 201 | 0.201 |
| E14.5 retina | ACTGTGTATG CAGAAAAAAA (2) CAGGCAAAAC (2) TACGTTTGGT TGGTTGCTGG
| 962 | 0.962 |
| E16.5 retina | CAGGCAAAAC (2) TACGTTTGGT TGGTTGCTGG
| 806 | 0.806 |
| E18.5 retina | CAGAAAAAAA (2) CAGGCAAAAC (2) TACGTTTGGT TGGTTGCTGG
| 274.6 | 0.2746 |
| P0.5 retina | AATCCTGTGA (2) CAGAAAAAAA (2) CAGGCAAAAC (2) TACGTTTGGT TGGTTGCTGG
| 221.8 | 0.2218 |
| P2.5 retina | CAGAAAAAAA (2) CAGGCAAAAC (2) TACGTTTGGT TGGTTGCTGG
| 209.3 | 0.2093 |
| P4.5 retina | CAGAAAAAAA (2) CAGGCAAAAC (2) TACGTTTGGT TGGTTGCTGG
| 180.3 | 0.1803 |
| P6.5 retina | ACTGTGTATG CAGAAAAAAA (2) CAGGCAAAAC (2) TACGTTTGGT TGGTTGCTGG
| 190.1 | 0.1901 |
| P10.5 crx- retina | CAGAAAAAAA (2) CAGGCAAAAC (2) TACGTTTGGT TGGTTGCTGG
| 302.8 | 0.3028 |
| P10.5 crx+ retina | AATCCTGTGA (2) CAGAAAAAAA (2) CAGAAGAAGA CAGGCAAAAC (2) TACGTTTGGT TGGTTGCTGG
| 132.7 | 0.1327 |
| Adult retinal | AATCCTGTGA (2) CAGGCAAAAC (2) TACGTTTGGT TGGTTGCTGG
| 240.8 | 0.2408 |
| ONL | CAGGCAAAAC (2) GAGAAGGAAG TACGTTTGGT TGGTTGCTGG
| 440.5 | 0.4405 |