Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.236211	Thrap3	thyroid hormone receptor associated protein 3	4	4 D2.2	230753
Gene Ontology	mediator complex | receptor activity | transcription from Pol II promoter
Human Homolog	THRAP3[thyroid hormone receptor associated protein 3]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 4 In Situ Hybridization Images

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SAGE Tags

Total 59 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CAAGAAGACT GCCTCTGCAT (2) GGGCCAGTAT TTTAGGGGAG 31 0.031 Cb medulloblastoma GCCTCTGCAT (2) TTTAGGGGAG 11.5 0.0115 P8 GC+1d culture CAAGAAGACT CACCCTGCTC GCCTCTGCAT (2) TTTAGGGGAG 34.2 0.0342 P8 GC+SHH+1d culture ACAAGTTCAG CACCCTGCTC GCCTCTGCAT (2) TTTAGGGGAG 29.2 0.0292 3T3 fibroblasts CACCCTGCTC GCCTCTGCAT (2) 10.5 0.0105 E15 cortex GCCTCTGCAT (2) 39.6 0.0396 P1 cortex ACAAGTTCAG GCCTCTGCAT (2) 22.7 0.0227 Hypothalamus GCCTCTGCAT (2) TTTAGGGGAG 14.5 0.0145 E12.5 retina CAAGAAGACT GCCTCTGCAT (2) GGGCCAGTAT TTTAGGGGAG 48.9 0.0489 E14.5 retina GCCTCTGCAT (2) TTTAGGGGAG 25.5 0.0255 E16.5 retina GACCAAACCA GCCTCTGCAT (2) TTAAAGAGCA (2) TTTAGGGGAG 28.9 0.0289 E18.5 retina CAAGAAGACT GCCTCTGCAT (2) TTTAGGGGAG 25.5 0.0255 P0.5 retina GCCTCTGCAT (2) TTAAAGAGCA (2) TTTAGGGGAG 35.4 0.0354 P2.5 retina GCCTCTGCAT (2) TTAAAGAGCA (2) TTTAGGGGAG 44.1 0.0441 P4.5 retina GCCTCTGCAT (2) TTTAGGGGAG 39.6 0.0396 P6.5 retina ACAAGTTCAG GCCTCTGCAT (2) TTTAGGGGAG 30.1 0.0301 P10.5 crx- retina GACCAAACCA GCCTCTGCAT (2) TTTAGGGGAG 37.2 0.0372 P10.5 crx+ retina CAAGAAGACT CACCCTGCTC GCCTCTGCAT (2) GGGCCAGTAT TTTAGGGGAG 40.3 0.0403 Adult retinal CACCCTGCTC GCCTCTGCAT (2) TTAAAGAGCA (2) TTTAGGGGAG 44.5 0.0445 ONL GCCTCTGCAT (2) TTTAGGGGAG 21 0.021