| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | GCCCACGAAA
| 1.6 | 0.0016 |
| Cb medulloblastoma | GTGGATCACA
| 2.3 | 0.0023 |
| P8 GC+1d culture | GCTGCTGCTT (2) GTGGATCACA
| 10.3 | 0.0103 |
| P8 GC+SHH+1d culture | GCTGCTGCTT (2) GTGGATCACA
| 5.8 | 0.0058 |
| E15 cortex | GCCCACGAAA GCTGCTGCTT (2) GTGGATCACA
| 14.7 | 0.0147 |
| P1 cortex | GCCCACGAAA GCTGCTGCTT (2)
| 9 | 0.009 |
| Hypothalamus | GCCCACGAAA GCTGCTGCTT (2) GTGGATCACA
| 9 | 0.009 |
| E12.5 retina | GCTGCTGCTT (2) GTGGATCACA
| 5.7 | 0.0057 |
| E14.5 retina | GTAGCAAAAG GTGGATCACA
| 5.4 | 0.0054 |
| E16.5 retina | GCTGCTGCTT (2) GTAGCAAAAG GTGGATCACA
| 12.6 | 0.0126 |
| E18.5 retina | GTAGCAAAAG
| 1.8 | 0.0018 |
| P0.5 retina | GCTGCTGCTT (2) GTGGATCACA
| 7.9 | 0.0079 |
| P2.5 retina | GCTGCTGCTT (2) GTAGCAAAAG
| 7.1 | 0.0071 |
| P4.5 retina | GCCCACGAAA GTAGCAAAAG GTGGATCACA
| 17.8 | 0.0178 |
| P6.5 retina | GCTGCTGCTT (2) GTAGCAAAAG GTGGATCACA
| 20 | 0.02 |
| P10.5 crx- retina | GTAGCAAAAG
| 13 | 0.013 |
| P10.5 crx+ retina | GCTGCTGCTT (2) GTAGCAAAAG GTGGATCACA
| 46.1 | 0.0461 |
| Adult retinal | GCCCACGAAA GCTGCTGCTT (2) GTAGCAAAAG GTGGATCACA
| 70.5 | 0.0705 |
| ONL | GCCCACGAAA GTAGCAAAAG GTGGATCACA
| 105.3 | 0.1053 |