Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.2402	AA536749	expressed sequence AA536749	11		26936
Mm.2402	AI647711	expressed sequence AI647711	11		103810
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 134 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAATAAATAA (2) ACGCCTGACC (2) ATGGTCAGAG (2) GAAACAAAAA (3) GGCTCCCTGC GTAGCACACA GTGGTGCACG TGCCACCTGA (2) TGGGGACCTG (2) 31.1 0.0311 Cb medulloblastoma AAATAAATAA (2) GGCTCCCTGC GTGGTGCACG TGCCACCTGA (2) TGGGGACCTG (2) 50.8 0.0508 P8 GC+1d culture AAATAAATAA (2) GGCTCCCTGC GTAGCACACA GTGGTGCACG TGCCACCTGA (2) TGGGGACCTG (2) 36.5 0.0365 P8 GC+SHH+1d culture AAATAAATAA (2) AACTGTATCA (4) GGCTCCCTGC GTAGCACACA GTGGCGGATT (2) GTGGTGCACG TGCCACCTGA (2) TGGGGACCTG (2) 37.5 0.0375 3T3 fibroblasts GTAGCACACA GTGGCGGATT (2) GTGGTGCACG TGGGGACCTG (2) 35 0.035 E15 cortex ACGCCTGACC (2) GGCTCCCTGC GTGGTGCACG TGCCACCTGA (2) TGGGGACCTG (2) 69.1 0.0691 P1 cortex AACTGTATCA (4) AGCAGCCCCT GGCTCCCTGC GTGGTGCACG TGGGGACCTG (2) 58.9 0.0589 Hypothalamus AAATAAATAA (2) AGCAGCCCCT GGCTCCCTGC GTGGTGCACG TGGGGCACTG (4) 30.7 0.0307 E12.5 retina AAATAAATAA (2) GTGGTGCACG TGCCACCTGA (2) TGGGGACCTG (2) 13.2 0.0132 E14.5 retina AAATAAATAA (2) AACTGTATCA (4) GAGGCCCACA (2) GGCTCCCTGC GGTGGTGCTC (2) GTAGCACACA GTGGTGCACG TGCACTCTGA (2) TGCCACCTGA (2) 41.8 0.0418 E16.5 retina AAATAAATAA (2) ATGGTCAGAG (2) GTGGTGCACG TGCCACCTGA (2) 14.5 0.0145 E18.5 retina AAATAAATAA (2) AACTGTATCA (4) GGCTCCCTGC GGTGGTGCTC (2) GTAGCACACA GTGGCGGATT (2) GTGGTGCACG TGCACTCTGA (2) TGCCACCTGA (2) TGGGGACCTG (2) 49.1 0.0491 P0.5 retina AAATAAATAA (2) GGCTCCCTGC GTGGTGCACG TGCCACCTGA (2) TGGGGACCTG (2) 17.8 0.0178 P2.5 retina AAATAAATAA (2) GAAACAAAAA (3) GGCTCCCTGC GTGGCGGATT (2) GTGGTGCACG TGCCACCTGA (2) TGGGGACCTG (2) 37 0.037 P4.5 retina AAATAAATAA (2) AACTGTATCA (4) ATGGTCAGAG (2) GAAACAAAAA (3) GGCTCCCTGC GTAGCACACA GTGGTGCACG TGCACTCTGA (2) TGCCACCTGA (2) 71.4 0.0714 P6.5 retina AAATAAATAA (2) AACTGTATCA (4) GAAACAAAAA (3) GGCTCCCTGC GTAGCACACA GTGGTGCACG TGGGGACCTG (2) 33.4 0.0334 P10.5 crx- retina AAATAAATAA (2) AACTGTATCA (4) GGCTCCCTGC GTGGTGCACG TGCACTCTGA (2) TGCCACCTGA (2) TGGGGACCTG (2) 26.1 0.0261 P10.5 crx+ retina AAATAAATAA (2) AACTGTATCA (4) GGCTCCCTGC GTGGTGCACG TGCCACCTGA (2) TGGGGACCTG (2) 55.6 0.0556 Adult retinal AACTGTATCA (4) ACGCCTGACC (2) AGCAGCCCCT GAAACAAAAA (3) GGCTCCCTGC GGTGGTGCTC (2) GTGGTGCACG TGCACTCTGA (2) TGGGGACCTG (2) TGGGGCACTG (4) 39.3 0.0393 ONL AAATAAATAA (2) AACTGTATCA (4) GAAACAAAAA (3) GAGGCCCACA (2) GGCTCCCTGC GTGGTGCACG TGCACTCTGA (2) TGGGGACCTG (2) TTGTCTGGAG 57.3 0.0573