Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.24042	Sfrs6	splicing factor, arginine/serine-rich 6	2	2 79.8 cM	67996
Gene Ontology	mRNA splice site selection | nuclear mRNA splicing, via spliceosome | nucleic acid binding | nucleus | pre-mRNA splicing factor activity | RNA binding
Human Homolog	SFRS6[splicing factor, arginine/serine-rich 6]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 126 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AGTGTGAAAC (3) CCTGTAGACC CCTGTAGCCC TCCCCTCCCC TCCCCTCCGC TGATTAAAGT TGGTTGCTGG TTTTTTTTTT (2) 96.2 0.0962 Cb medulloblastoma AGTGTGAAAC (3) CCTGTAGCCC TGGTTGCTGG TTTTTTTTTT (2) 127.1 0.1271 P8 GC+1d culture AGTGTGAAAC (3) CAAATAAAGG CCTGTAGACC CCTGTAGCCC GCAGGTATCA TGGTTGCTGG TGTGTTTGTT TTCTTTTGTT (2) TTTTTTTTTT (2) 90.1 0.0901 P8 GC+SHH+1d culture AGTGTGAAAC (3) CAGTCAGAAA GCAGGTATCA TGGTTGCTGG TTTTTTTTTT (2) 102 0.102 3T3 fibroblasts CCTGTAGACC GCAGGTATCA TGGTTGCTGG 231.3 0.2313 E15 cortex AGTGTGAAAC (3) CCTGTAGACC TGGTTGCTGG TTTTTTTTTT (2) 296.8 0.2968 P1 cortex TATCCAAGGG TGGTTGCTGG TTTTTTTTTT (2) 100 0.1 Hypothalamus AGTGTGAAAC (3) CCTGTAGCCC TCCCCTCCGC TGATTAAAGT TGGTTGCTGG TTTTTTTTTT (2) 367.6 0.3676 E12.5 retina AGTGTGAAAC (3) CAATAAGGCA CAGTCAGAAA CCTGTAGACC GCAGGTATCA TGGTTGCTGG TTTTTTTTTT (2) 193.5 0.1935 E14.5 retina AGTGTGAAAC (3) CCTGTAGACC GCAGGTATCA TATCCAAGGG TGATTAAAGT TGGTTGCTGG TTCTTTTGTT (2) TTTTTTTTTT (2) 987.4 0.9874 E16.5 retina AGTGTGAAAC (3) CAGTCAGAAA CCTGTAGACC GCAGGTATCA TCCCCTCCGC TGATTAAAGT TGGTTGCTGG TTTTTTTTTT (2) 802.2 0.8022 E18.5 retina AGTGTGAAAC (3) CCTGTAGCCC GCAGGTATCA TGATTAAAGT TGGTTGCTGG TTTTTTTTTT (2) 294.6 0.2946 P0.5 retina AGTGTGAAAC (3) CAATAAGGCA CAGTCAGAAA CCTGTAGACC CCTGTAGCCC TCCCCTCCGC TGGTTGCTGG TTTTTTTTTT (2) 231.7 0.2317 P2.5 retina AGTGTGAAAC (3) CAAATAAAGG CAATAAGGCA CAGTCAGAAA CCTGTAGACC GCAGGTATCA TGGTTGCTGG TGTGTTTGTT TTTTTTTTTT (2) 202.5 0.2025 P4.5 retina AGTGTGAAAC (3) CAGTCAGAAA GCAGGTATCA TCCCCTCCGC TGGTTGCTGG TGTGTTTGTT TTTTTTTTTT (2) 192.3 0.1923 P6.5 retina AGTGTGAAAC (3) CAAATAAAGG CCTGTAGACC CCTGTAGCCC TGGTTGCTGG TTTTTTTTTT (2) 178.3 0.1783 P10.5 crx- retina AGTGTGAAAC (3) CCTGTAGACC GCAGGTATCA TCCCCTCCCC TGGTTGCTGG 297.3 0.2973 P10.5 crx+ retina AGTGTGAAAC (3) CCTGTAGACC CCTGTAGCCC GCAGGTATCA TGGTTGCTGG TTTTTTTTTT (2) 123 0.123 Adult retinal AGTGTGAAAC (3) CAAATAAAGG CCTGTAGACC CCTGTAGCCC GCAGGTATCA TGGTTGCTGG TTTTTTTTTT (2) 242.7 0.2427 ONL AGTGTGAAAC (3) CAGTCAGAAA GCAGGTATCA TCCCCTCCCC TGGTTGCTGG TTCTTTTGTT (2) TTTTTTTTTT (2) 413.6 0.4136