| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | GGGGTGAAGA TGGCTGCTGG (3)
| 3.2 | 0.0032 |
| Cb medulloblastoma | GGGGTGACCA (2) TGTGTCTTCA (3) TTTTTCTAAT
| 9.2 | 0.0092 |
| P8 GC+1d culture | GGGGTGACCA (2) GGTAGAGCAG (2) TGCACCCAAG TGGCTGCTGG (3) TGTGTCTTCA (3) TTATTTAATA TTTTTCTAAT
| 17 | 0.017 |
| P8 GC+SHH+1d culture | GGTAGAGCAG (2) TGGCTGCTGG (3) TGTGTCTTCA (3) TTATTTAATA TTTTTCTAAT
| 10.6 | 0.0106 |
| 3T3 fibroblasts | TGGCTGCTGG (3)
| 3.5 | 0.0035 |
| E15 cortex | GGTAGAGCAG (2) TGGCTGCTGG (3)
| 9.8 | 0.0098 |
| P1 cortex | GGTAGAGCAG (2) TGTGTCTTCA (3) TTATTTAATA
| 13.5 | 0.0135 |
| Hypothalamus | TGCACCCAAG TGGCTGCTGG (3) TTTTTCTAAT
| 7.2 | 0.0072 |
| E12.5 retina | GGGGTGACCA (2) TGGCTGCTGG (3)
| 3.8 | 0.0038 |
| E14.5 retina | TGGCTGCTGG (3) TTTTTCTAAT
| 31 | 0.031 |
| E16.5 retina | TGGCTGCTGG (3) TGTGTCTTCA (3) TTTTTCTAAT
| 12.6 | 0.0126 |
| E18.5 retina | GGGGTGAAGA GGGGTGACCA (2) TGGCTGCTGG (3) TGTGTCTTCA (3) TTATTTAATA TTTTTCTAAT
| 12.6 | 0.0126 |
| P0.5 retina | GGGGTGACCA (2)
| 2 | 0.002 |
| P2.5 retina | GGTAGAGCAG (2) TGCACCCAAG TGGCTGCTGG (3)
| 12.4 | 0.0124 |
| P4.5 retina | GGGGTGAAGA TGGCTGCTGG (3) TTATTTAATA
| 10 | 0.01 |
| P6.5 retina | GGGGTGACCA (2) TGGCTGCTGG (3) TTATTTAATA TTTTTCTAAT
| 10 | 0.01 |
| P10.5 crx- retina | GGTAGAGCAG (2) TGGCTGCTGG (3) TGTGTCTTCA (3) TTTTTCTAAT
| 26 | 0.026 |
| P10.5 crx+ retina | GGGGTGACCA (2)
| 1.9 | 0.0019 |
| Adult retinal | GGTAGAGCAG (2) TGGCTGCTGG (3) TTATTTAATA
| 9.4 | 0.0094 |
| ONL | TGGCTGCTGG (3)
| 5.7 | 0.0057 |